Streptomyces sp. RPA4-2: HEP85_37530
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Entry
HEP85_37530 CDS
T10422
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
srpz Streptomyces sp. RPA4-2
Brite
KEGG Orthology (KO) [BR:
srpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srpz03021
]
HEP85_37530
Transcription machinery [BR:
srpz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HEP85_37530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
HTH_23
MarR_2
HTH_Crp_2
HTH_37
Sigma70_ECF
HTH_3
HTH_Tnp_4
HTH_31
MarR
DUF1492
HTH_24
HTH_38
Motif
Other DBs
NCBI-ProteinID:
QIY66220
LinkDB
All DBs
Position
complement(8540629..8541468)
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AA seq
279 aa
AA seq
DB search
MTVTKTAEARTVVLPEIADPSKVAPKDARQLSRLFFDQLAVLEEGTPEYQYARNTLIEMN
MSLVQYAAGRFRSRGQDEMEDIVQVGTIGLIKAIDRFELSREVEFTSFAVPYIVGEIKRF
FRDTSWAVHVPRRLQEARIQLAKATEELRSRLGRMPTVRELSQLMCLSEEEVNEARLASN
GYNSSSLDATISSSEDGEAALADFIGIDDRALELVEDFNALAPMIAELDDRERRIIHMRF
VEELTQAQIGERLGVSQMHVSRLLNRTLAKLREGMLTTS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgacgaagacggcagaggcacggaccgtggtgcttcccgagattgcggacccg
tcgaaggtcgcccccaaggacgcccggcagttgtccaggctgttcttcgaccagctcgcc
gtgctcgaagagggcacacccgagtaccagtacgcgcgcaacaccctcatcgagatgaac
atgtccctcgttcagtacgcggccgggcgcttccgcagccggggccaggacgagatggag
gacatcgtccaggtcggcacgatcgggctgatcaaggcgatcgaccggttcgagctgtcc
cgcgaggtcgagttcacctccttcgcggtcccctacatcgtcggtgagatcaagcgcttc
ttccgcgacacctcctgggcggtccatgtcccccgccgtctacaggaagcccgtatccag
ctcgccaaagccaccgaggaactccgcagccggctggggcgcatgcccaccgtcagggaa
ctctcgcagctgatgtgcctgagcgaggaggaagtcaacgaagcgcgtctggcttccaac
ggctacaactcctcctccctcgacgccaccatcagctccagcgaggacggcgaagcggcg
ctggccgacttcatcggcatcgatgaccgcgctctcgaactcgtcgaggacttcaacgcc
ctcgccccgatgatcgccgaactcgatgaccgcgagcggcgcatcatccacatgcggttc
gtcgaggaactcacccaggcccagatcggcgaacgcctcggcgtctcccagatgcacgtc
tcgcgcctgctcaatcgcaccctcgccaagctccgcgaaggcatgctcaccaccagctga
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