Streptomyces sp. RPA4-2: HEP85_42060
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Entry
HEP85_42060 CDS
T10422
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
srpz Streptomyces sp. RPA4-2
Brite
KEGG Orthology (KO) [BR:
srpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srpz03021
]
HEP85_42060
Transcription machinery [BR:
srpz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HEP85_42060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
MarR_2
HTH_Tnp_4
HTH_23
GerE
Sigma70_ECF
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
QIY66842
LinkDB
All DBs
Position
complement(9496222..9497082)
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AA seq
286 aa
AA seq
DB search
MATDAARHAVTAEGEALPLINEPLKVSPKDARTLSRQFFDRLAVLEEGTHEYQYARNTLI
EMNLSLVRYAAARFRSRNQDEMEDIVQVGTIGLIKAIDRFELTREVEFTSFAVPYIVGEI
KRFFRDTSWAVHVPRRLQEARIELAKATEELRTRLGRTPTTRELSALMSLSEEEVIEARK
ASNGYNSSSLDAALTADNGADGESVLADFIGEDDPALELVEDFNSLAPLIAGLDDRQRQI
IHMRFVEERTQAQIGEELGISQMHVSRLITRILKRLRSGLLDPSVA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggacgcggcacggcatgcggtgacggccgagggggaggcactccccctgatc
aacgagcctctgaaggtcagcccgaaggacgcgcgtactctgtcgcgtcagttcttcgac
cggctggccgtgctggaggaaggcacccacgagtaccagtacgcgcgcaacaccctgata
gagatgaacctctccctcgtgcggtacgcggcggcccgcttccgcagccgcaaccaggac
gagatggaggacatcgtccaggtcggcaccatcgggctcatcaaggcgatcgaccgcttc
gagctgacccgcgaggtcgagttcacctccttcgccgtcccgtacatcgtcggcgagatc
aagcgcttcttccgcgacaccagctgggcggtccacgtgccccggcgtctgcaggaggcc
cgtatcgagctggccaaggcgaccgaggagctgcgcacccgcctgggccggaccccgacc
acgcgcgagctgtccgcgctgatgtccctctccgaggaagaggtcatcgaggcccgcaag
gcctccaacggctacaactcctcgtccctggacgccgcgctcacggccgacaacggcgcg
gacggggagagcgtcctcgcggacttcatcggcgaggacgaccccgcgctcgaactggtc
gaggacttcaactccctggcgccgctgatcgcaggcctcgacgaccgtcagcgccagatc
atccacatgcgtttcgtcgaggagcgcacccaggcccagatcggtgaggagctcggcatc
tcgcagatgcacgtctcccgtctgatcacccgcatcctgaagcgtctgcgcagcgggctg
ctcgatccgtcggtcgcctga
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