Streptomyces sp. RPA4-2: HEP85_44000
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Entry
HEP85_44000 CDS
T10422
Name
(GenBank) class I tRNA ligase family protein
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
srpz Streptomyces sp. RPA4-2
Pathway
srpz00450
Selenocompound metabolism
srpz00970
Aminoacyl-tRNA biosynthesis
srpz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
srpz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HEP85_44000
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HEP85_44000
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
srpz01007
]
HEP85_44000
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srpz03016
]
HEP85_44000
Enzymes [BR:
srpz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
HEP85_44000
Amino acid related enzymes [BR:
srpz01007
]
Aminoacyl-tRNA synthetase
Class I (U)
HEP85_44000
Transfer RNA biogenesis [BR:
srpz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HEP85_44000
Prokaryotic type
Other AARSs
HEP85_44000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
XDO60729
LinkDB
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Position
1237331..1238902
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AA seq
523 aa
AA seq
DB search
MHIHHKVLLVPMQPTPNGRLHIGHGGGTYLRADVIARALRAQGHEVAVVTGSDVYEDWVV
AAAHREGRSPEETYRDHHTGIARDLSRLSIGLDAWIDPAGQTHRDAYRQLHEDVLTRLRA
TGAARTEDERIPYAQDTGRALVGPWIAGECPHCGRPCGGSTCTYCGEYFVPEQLVRARSR
VGDSPVEWRTERNWFATADDPRAIADRHRAAGLRPVFLAPLLRALDQHGGRVRLTGQGDW
GIRGTTLPAGKVISNGYFLYSVYCGEVHRALTGAAVNPFTPGSGVTTVGLFGSDNSTPGL
LVPDVIAQGSQGTLAPFDATVVNGMLHFEGHKCSTSKRHGIWLSELLEGTSVSADELRYA
LLHAPLDHGPADIDLRTLTHHIDALRTWRATVLRPALDRLRERPRPVWRPDPALKAAADQ
YALLTPYAPDLTRAVTAFDEWIGSPLEPDAGWLVGVALLGRPLLPELAGHVWARLGLPGE
PGLRRAAHLEPLPPRSPAAAAGPLPGPLTPASLRQYVHLQEPE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcacatccaccacaaggtcctgctcgttcccatgcagccgactcccaacggccgactg
cacatcggccatggcggcggcacctacctccgggccgacgtcatcgcccgcgcgctgcgc
gcccagggccacgaggtcgcggtcgtcaccggcagcgacgtgtacgaggactgggtggtg
gccgccgcccaccgcgaaggccgttctcccgaggagacgtaccgcgaccaccacacaggg
atcgcccgcgatctctcccgcctctccatcgggctggacgcctggatcgaccctgcgggg
cagacccaccgggacgcctaccggcagctccacgaggacgtcctgacccggctgcgggcg
accggagccgcccgtacggaggacgagcgcatcccgtacgcgcaggacaccggccgagca
ctggtcggcccgtggatcgcgggcgagtgcccccactgcgggcgcccgtgcggcggcagc
acctgcacctactgcggggagtacttcgtacccgagcagttggtccgcgcccgttcccgg
gtcggtgacagcccggtcgagtggcgtaccgagcggaactggttcgcgacggccgacgat
ccgcgggccatcgccgaccggcaccgcgccgcgggtctgcggccggtgttcctcgcgccg
ctgctgcgcgccctggaccagcacggcggccgcgtccggctgaccggccagggcgactgg
ggcatccgcggcacgaccctgccggccggcaaggtgatcagcaacggctacttcctgtac
agcgtctactgcggcgaggtgcaccgggcgctgaccggggccgcggtcaatcccttcaca
cccggcagcggtgtcaccaccgtcggcctgttcggcagcgacaactccacccccggactg
ctggtccctgacgtgatcgcccagggatcacagggaaccctggcgccgttcgacgccacc
gtcgtcaatggcatgctgcatttcgagggccacaagtgctccaccagcaagcgtcacggc
atctggctctccgagttgctggagggcacgtccgtctccgccgacgagctgcgctacgcc
ctgctgcacgcgcccctcgaccacggcccggcggacatcgacctccggacgctcacccac
cacatcgatgccctgcgcacgtggcgggccacggtgctgcgccccgccctcgaccggctg
cgcgaacggccgcgccccgtgtggcggcccgatccggcgctcaaggccgcggccgaccag
tacgcgctgctcaccccctacgccccggacctgacgcgcgccgtgacggctttcgacgaa
tggatcggcagtcccctcgaaccggacgcggggtggctggtgggcgtggccctgctcggc
cggccgctgcttccggaactggccggccacgtctgggcccgactgggccttcccggcgag
cccggcctgcgccgagcggcacacctcgaaccgctgccaccgcggtccccggccgccgca
gcgggcccgctccccggcccgctcaccccggcgagcctgcggcagtacgtgcacctccag
gaaccggagtga
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