Streptococcus ruminantium: SR187_0800
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Entry
SR187_0800 CDS
T05916
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
srq
Streptococcus ruminantium
Pathway
srq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
srq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SR187_0800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srq03021
]
SR187_0800
03400 DNA repair and recombination proteins [BR:
srq03400
]
SR187_0800
Enzymes [BR:
srq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SR187_0800
Transcription machinery [BR:
srq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SR187_0800
DNA repair and recombination proteins [BR:
srq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SR187_0800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
BBA91791
UniProt:
A0A2Z5TWQ6
LinkDB
All DBs
Position
118286..121906
Genome browser
AA seq
1206 aa
AA seq
DB search
MQITLASPSKVRSWSYGEVKKPETINYRTLKPERDGLFDEVIFGPTKDWECSCGKYKRIR
YKGITCDRCGVEVTRAKVRRERMGHIELKAPISHIWYFKGIPSRMGLTLDMSPRALEEVI
YFAAYVVIDPKDTPLEHKSIMTEREYRERLREYGYGSFVAKMGAEAIQDLLKQVDLPKEI
AALKEELKTASGQKRIKAVRRLDVLDAFYKSGNKPEWMILNILPVIPPDLRPMVQLDGGR
FAASDLNELYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNGRRGRPITGP
GSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPREMAIELFKP
FVMREIVAREIAGNVKAAKRLIERGDDRIWDILEEVIKEHPVLLNRAPTLHRLGIQAFEP
VLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARILMLAAEHILNPKDGKPV
VTPSQDMVLGNYYLTMEDAGREGEGMVFKDADEAIMAYRNGYVHLHTRVGIATDSLDKPW
KDNQKHKVMMTTVGKILFNAIMPEGLPYLQEPNNANLTDGTPDKYFLEPGSDIKAAIAAL
PLNQPFKKKNLGNIIAEIFKRFRTTETSALLDRLKDLGYYHSTLAGLTVGIADIPVIDNK
AEIIEESHERVEQIKKQFRRGMITDDERYAAVTDEWRSAKEKLEKRLVEKQDPKNPIVMM
MDSGARGNISNFSQLAGMRGLMSAPNGRIMELPILSNFREGLSVLEMFFSTHGARKGMTD
TALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLDIRSITDGKEMIEPLEERLQGRYTK
KTVKHPETGAVIIGPNQLITEDIAREIVNSGVEQVTIRSVFTCNTRHGVCRHCYGINLAT
GDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNSDITQGLPRVQEIFEARNPKGE
AVITEVKGEVTAIEEDASTRTKKVFVKGVTGEGEYVVPFTARMKVEVGDQVARGAALTEG
SIQPKRLLEVRDVLAVETYLLSEVQKVYRSQGVEIGDKHIEVMVRQMLRKVRVMDPGDTD
LLMGTLMDITDFTDANAEVVIAGGIPATARPVLMGITKASLETNSFLSAASFQETTRVLT
DAAIRGKRDNLLGLKENVIIGKIIPAGTGMARYRNLEPQAINEVEIIEDTIAEELAEEAR
LEEATE
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcacgttagcttcaccaagcaaggtccgctcatggtcttatggtgaggttaaa
aaacctgaaacaatcaactatcgtacactcaagccagaacgtgacggtctttttgacgag
gtgatttttggtccaaccaaggattgggagtgttcatgtggaaaatacaagcgtatccgt
tacaaaggaattacttgtgaccgctgtggtgtagaagtgactcgtgccaaagttcgtcgt
gagcgtatggggcacatcgagttgaaggcacccatttcacatatttggtatttcaagggg
attccaagccgtatgggcttgaccttggatatgagtcctcgtgcgctggaagaagttatc
tattttgcggcttatgtggttatcgatccaaaagataccccgcttgagcacaaatcaatc
atgactgaacgtgagtatcgtgaacgcttgcgtgagtatggttatggctcatttgttgct
aaaatgggagcagaagccattcaagatcttttgaaacaagttgatcttccaaaagaaatt
gcggctttgaaagaggaattaaaaacagcttctggtcaaaagcggattaaggcagttcgt
cgcttggacgtactggatgctttttacaaatctgggaacaagcctgaatggatgatcctt
aacattcttccggttattccaccagatttgcgtccgatggtccagttggatggggggcgt
tttgctgcttctgacttgaatgaattgtaccgccgtgttattaaccgtaataaccgtttg
gcgcgccttttagagctaaatgctccaggaatcatcgtgcaaaacgagaaacgtatgcta
caagaagcggttgatgctttgattgataatggtcgccgtggccgtcctatcacaggaccg
ggtagccgtccactcaaatcgctcagccacatgctaaaaggtaagcaaggtcgattccgt
caaaacttgcttggtaagcgtgttgacttctcaggtcgttcggttatcgctgttggtcca
actcttaaaatgtaccaatgtggtgttccacgtgagatggctattgagttgttcaagcca
tttgtcatgcgtgaaattgtcgctcgtgaaattgctggtaacgtaaaggctgcaaaacgt
ttaattgaacgtggggatgatcgtatttgggacatcttggaagaagttatcaaagaacat
cctgttctcttgaaccgtgcaccgaccctccaccgtttgggtattcaggcttttgagccg
gttcttattgatggtaaggctcttcgtctgcatccacttgtctgtgaagcttataatgcg
gactttgacggtgaccagatggcgattcacgttccgttatcagaagaagcacaggcagaa
gctcgtatcctcatgctggcagcagaacacatcctaaaccctaaagatggtaagccagtt
gtaacaccgtctcaagatatggtcttgggtaactattatctaaccatggaagatgcgggt
cgtgagggtgaaggtatggtctttaaagatgcggatgaagccattatggcctaccgcaat
ggttatgttcatttgcacacacgtgtagggattgcaacggatagtctagataagccttgg
aaggataatcaaaaacacaaggtgatgatgacaaccgttggaaaaatcttgttcaacgca
atcatgccagaaggtctgccttatttacaagagccaaataatgccaacttaactgatggt
acaccagataaatacttcttggaaccgggttctgacatcaaagcggctattgcagcctta
cctctcaatcaaccgttcaagaagaaaaatcttggaaatatcatcgctgaaatcttcaaa
cgtttccgtacaacagaaacttcagcccttcttgaccgcttgaaagacttgggttactat
cattcaacgctcgctggtttgacagtgggtattgcagatattccagttattgataacaag
gctgaaatcattgaagagtctcacgaacgcgtagagcaaatcaagaaacaattccgtcgt
ggtatgattaccgatgatgaacgatatgcagcagttactgatgagtggcgttcggctaaa
gagaaacttgaaaaacgccttgttgaaaaacaagatccgaagaaccctatcgttatgatg
atggactctggtgctcgtggtaacatctccaacttctcacagcttgcgggtatgcgtggt
ctgatgtcagcaccgaatggacgtatcatggaattgccaatcttgtctaacttccgtgag
ggtctttcggtactcgaaatgttcttctcaactcacggtgcccgtaagggtatgacggat
acggccttgaagactgccgattctggttacttgactcgtcgcttggttgacgttgcccaa
gatgtgattatccgtgaggatgactgtggaactgaccggggtcttgacatccgttctatt
accgatggtaaggaaatgattgagccacttgaagaacgtcttcaaggacgttacaccaag
aaaactgttaaacatcctgaaaccggcgcagttattatcggtccaaatcaattgattact
gaagatattgcccgtgaaatcgtaaatagtggtgtggagcaagtgactatccgtagcgta
tttacatgtaatactcgacatggcgtctgccgtcactgctatggtatcaacttggcaaca
ggagatgcagttgaagttggtgaagcagttggtacgatcgctgctcagtctattggtgag
cctggtacacagcttaccatgcgtaccttccacacgggtggtgtagcctcaaacagtgat
attacacagggtcttcctcgtgttcaagaaatctttgaagcgcgtaaccctaaaggtgaa
gcggtcattaccgaggtcaaaggtgaagtcacagcgattgaagaagatgcttcgacgcgt
accaagaaggtctttgtcaaaggtgttacgggcgaaggtgagtatgtagtgccatttaca
gctcgtatgaaggttgaagtaggtgatcaagttgctcgcggtgctgctcttacagaaggt
tctatccagccaaaacgcttacttgaagttcgtgatgtcttggcagtggaaacctatctt
ctttctgaagttcaaaaagtttaccgtagtcaaggggtagaaattggcgacaaacacatt
gaggttatggttcgtcagatgcttcgcaaagtacgtgttatggatccgggtgataccgat
cttcttatggggacacttatggatattactgactttaccgatgccaatgctgaagtggtc
attgcaggtggtattccagcgacagcacgcccagtccttatggggattaccaaggcttcc
cttgagactaactcattcttatcggcggcatccttccaagaaacgactcgtgttcttaca
gatgcagcgattcgtggtaaacgtgataaccttcttggtcttaaagaaaatgttatcatc
ggtaagattattccggcaggtacaggtatggcccgctatcgtaatcttgaaccacaagct
atcaatgaggttgaaatcattgaagatactatagctgaagagcttgctgaggaagctagg
cttgaagaagcgactgaataa
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integrated database retrieval system
