Streptococcus ruminantium: SR187_1220
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Entry
SR187_1220 CDS
T05916
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
srq
Streptococcus ruminantium
Pathway
srq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SR187_1220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srq03400
]
SR187_1220
Enzymes [BR:
srq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SR187_1220
DNA repair and recombination proteins [BR:
srq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SR187_1220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
UvrD-helicase
HHH_5
AAA_22
Herpes_Helicase
DEAD
AAA_12
AAA_28
SLFN-g3_helicase
5_3_exonuc
UvrD_C
AAA_29
nSTAND3
NPHP3_N
T2SSE
DNA_pol_lambd_f
HHH
DUF6428
AAA
Motif
Other DBs
NCBI-ProteinID:
BBA91875
UniProt:
A0A2Z5TN20
LinkDB
All DBs
Position
complement(217718..220213)
Genome browser
AA seq
831 aa
AA seq
DB search
MDEIYFTGTIDRIIFENPSNFYKILLLEIEETNTEYDDYEIIVTGTIADIIEGEDYRFYG
NLITHPKYGQQLQITRYERSKPTASGLVKYFSSEHFKGIGRKTAEKIVQLYGEDTIDKIL
AEPEKLTQITGLSSKNKQAFIEKLRLNYGTEMILAKLAEYGIPNKLAFQIQDQYKEKTLK
IIEENPYQLVEDVQGLGFTIADKIAENLGIASDSPQRFRAGMLFSLIHRSMETGDTYVEA
RDLLEATLELLEKSRHIELDPAAVAKELTGLIVDEKVQQEGTKIFDNSLYFAEHGIHKNL
TRLMGKNGFKPFPRKEVEAAIAELETMSDLTYDTIQKEAIVQAITNPIFILTGGPGTGKT
TVINGIIAVYAILHKIDLTRSREECPVLLAAPTGRAARRMNELTGLPAATIHRHLGLVEG
QEDSYRDDYLEADFVIIDEFSMVDTWLANQLFQNISSQTQVLIVGDAEQLPSVSPGQVLA
DLLKIDKLPSITLERIYRQSDDSTIVTLASQIRQGNLPDDFREKKADRSYFEAQNEQIPA
MIERIVGAAIKSGIPANEVQILAPMYRGAAGIDQLNTMTQTLLNPLEEGELEFTHNELVF
RCGDRIIHLVNDAEANVFNGDLGYITDLLPAKYTDSKQDEITIDFDGSEVTYPRNEWYKI
TLAYAMSIHKSQGSEFQVVILPITRSSHRMLQRNLIYTAITRSRSKLILLGEIAAFDYAV
KNTGTSRKTYLVPRFQGEMAEQENETTPSDGQLSKTAQANSTPTPAQPVTQEESSRPQQT
HHQLSLLEEEQPETTTSQPKEFILTAENILTIDPMIGISQTDLATFFKIDS
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaatctatttcaccggaactattgaccggattatatttgaaaatcctagcaat
ttttacaaaattctcctcctcgaaattgaagaaaccaataccgaatatgacgattatgaa
attattgttacaggaaccattgcagatattatcgaaggagaagattaccgcttctatggc
aatctaatcacccatccaaaatacggtcaacaacttcaaatcacacgctacgaacgcagc
aaaccaactgcatccggtctagtcaaatatttctctagcgagcattttaaaggaattggt
cgcaagacagcagagaaaatcgtccaactctacggtgaggataccatcgacaagatacta
gccgaaccagaaaaactgacccagattacagggctttccagtaagaataagcaggccttt
attgaaaagctccgtctcaattacggcaccgaaatgatcttagccaaactggcagaatac
ggcatcccgaataaactagccttccaaatccaagaccagtataaggaaaaaacactaaaa
atcattgaagaaaatccttatcagctcgtcgaggatgtgcaaggtttaggctttaccatt
gccgacaaaatcgcggagaatctgggcattgccagcgactcccctcaacgctttcgagcg
ggtatgctctttagcctcatccatcgctccatggaaacaggtgatacctatgttgaggct
agagatttattggaagcaaccctggaattactagaaaaatcccgccatatcgaactggac
cctgccgccgttgccaaagaattgacaggtctgattgtagatgaaaaagtccagcaagaa
ggaacgaaaatttttgacaacagcctctactttgccgaacatggcatccataaaaatctt
acccgcctgatgggaaaaaatggtttcaaaccctttccacgaaaggaggttgaagcggcc
atagcagaactagaaaccatgtctgacctgacctacgatactattcagaaagaggccatt
gttcaagccattaccaatcccatctttatcctaactggtggacccggaaccggaaaaact
actgttatcaatggaattatcgctgtctatgctatcttacacaagattgacctcacccgc
agtcgcgaagaatgccctgtcctcctagccgctccgaccggacgagccgccagacggatg
aacgaattgacaggtctaccagctgcgaccatccatcgccacctaggtttggtcgaagga
caggaagactcttaccgagatgactatctggaagctgattttgtcatcattgatgaattt
tctatggtagatacctggctagccaaccagctcttccagaatatctcctcccagactcag
gttctcattgtcggagatgccgaacagctcccatcagtcagtcccggccaagtccttgcc
gatctattaaagattgacaaactcccaagtattaccctagaacgtatttatcgccagtca
gatgactcaaccattgtcacactagccagccagatccgtcaaggaaatttgcctgatgac
ttccgagaaaaaaaggccgaccgatcctactttgaagcccaaaacgagcaaatcccagct
atgattgaacgaattgtcggagctgccatcaagtccggcattccagccaatgaggtgcaa
atccttgcacccatgtaccgtggagcagcaggtatcgaccagctcaataccatgacacag
actctactaaatcccttagaagaaggagaattggaatttactcacaatgaactggtcttt
cgctgtggagatcggattatccatttagtcaacgatgccgaagccaatgtcttcaatgga
gacttaggatatattacagacctccttccagccaagtataccgattctaagcaggacgaa
atcactattgactttgacggaagtgaagtcacctatcctcgaaacgagtggtacaaaatc
acactggcctacgccatgtctattcacaaatcacaaggaagtgagtttcaggtggttatc
ctccccatcactcgctccagccaccgtatgctccaacgcaacctcatctacacagccatt
acccgttctaggagcaagctcattttactaggtgagattgccgcctttgactatgccgtc
aaaaacaccggaactagtcgcaagacttacctagtcccacgtttccaaggggaaatggct
gagcaggaaaacgaaacaacaccctcagacggtcaactcagcaaaactgctcaagcaaac
tcgactccaacacctgctcaaccagtcactcaagaagaatcaagtcgtccacaacaaacc
catcatcaactctcccttcttgaggaagaacaaccagaaacaaccacttcccagcccaaa
gaattcatcctgaccgcagagaatatcctgaccattgaccctatgatcggaatcagtcag
acagatctcgccacttttttcaaaatagatagctga
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