Streptococcus ruminantium: SR187_7840
Help
Entry
SR187_7840 CDS
T05916
Name
(GenBank) ATP-dependent helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
srq
Streptococcus ruminantium
Brite
KEGG Orthology (KO) [BR:
srq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srq03019
]
SR187_7840
03009 Ribosome biogenesis [BR:
srq03009
]
SR187_7840
Enzymes [BR:
srq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SR187_7840
Messenger RNA biogenesis [BR:
srq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SR187_7840
Ribosome biogenesis [BR:
srq03009
]
Prokaryotic type
rRNA helicases
SR187_7840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SWI2_SNF2
Helicase_RecD
SMC_N
FNIP
Motif
Other DBs
NCBI-ProteinID:
BBA93171
UniProt:
A0A2Z5U0J8
LinkDB
All DBs
Position
complement(1612028..1613371)
Genome browser
AA seq
447 aa
AA seq
DB search
MKFTDMKLKPYIQEALKEINFVQPTEVQEKLIPVVLSGRDLIGESKTGSGKTHTFLIPIF
QKLNEELDQVQAVITAPSRELATQIYQAARQIAEHAETEVRVTNYVGGTDKNRQIDKLQS
NQPHIVIGTPGRIYDLVKSGDLAIHKAGIFVVDEADMTLDMGFLETVDKIAGSLPKNLQF
LVFSATIPQKLQPFLKKYLSNPVMEQIKTRTVISDTIENWLISTKGRDKNAQILEITKLM
QPYLAMIFVNTKTRADELHSYLIANGLRVAKIHGDIPPRERKRIMNQVKNLDYQYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLSGIAITLYQPSDDADIRELEKL
NIAFLPKEMKNGEFVDTYDRDRRVNREKSHEKLDLEMIGLVKKKKKKIKPGYKKKIQWAV
DEKRRKTKRIEARAKGRAERKAKRQTF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacggatatgaaactcaagccttatattcaggaggctttgaaagaaattaac
tttgtccagccgacagaagttcaggagaaattgattcctgttgttttgtcagggcgagac
ttgataggggaatcaaaaacaggttcgggtaagacccataccttcttgatcccgattttc
caaaaattaaatgaggaattggaccaagttcaggctgttattacagccccatctcgtgaa
ctggctactcagatttatcaagctgctcgtcaaattgctgagcatgctgagacggaagtt
cgggtgaccaactatgtcggtgggacggataaaaatcgtcaaatagacaagctccagtcc
aaccagccccatattgttattggaactcctggtcgtatctatgatttggtcaaatcaggt
gatctggccatccacaaggcaggtattttcgtggtggacgaggcggatatgactttagat
atgggctttttagaaactgtagataagattgcgggcagtctgcctaaaaatctgcaattt
ttggttttctcagccactattccgcagaaattgcagcctttcctgaagaaatatttgtcc
aatccagtcatggaacaaatcaaaactcgtactgttatctcagataccattgagaattgg
ctaatttcaaccaaaggtcgtgataaaaatgcacaaattttagaaattaccaagctaatg
cagccatatttagctatgatttttgtcaatactaagacccgtgcagatgagttgcatagc
tatctgatagcaaatggtttgcgggttgccaagattcatggagacattccaccacgtgaa
cgcaagcgcatcatgaatcaggttaagaatttggattatcaatacatcgtggcaacagat
ttagctgctcgtgggattgatattgaaggtgtcagccatgttatcaatgatgctattccg
caagatctttctttctttgtccatcgtgtcggtcgtacgggtcgtaatggtttatcaggt
atcgctattactctttatcaaccgagtgatgatgccgatattcgggagttggaaaaactc
aatattgcatttctaccaaaagaaatgaaaaacggtgagtttgttgatacctatgatcga
gaccgtcgtgtcaatcgtgaaaaatctcatgagaagttggatttagaaatgattggactg
gtcaagaagaaaaagaaaaaaatcaaacctggctataaaaagaaaatccaatgggcagtg
gatgaaaaacgtcgcaagaccaagcggattgaagcgcgtgcaaagggtcgtgcagagcga
aaggctaagcgccaaactttttaa
DBGET
integrated database retrieval system