KEGG   Streptococcus ruminantium: SR187_8200
Entry
SR187_8200        CDS       T05916                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit
  KO
K03701  excinuclease ABC subunit A
Organism
srq  Streptococcus ruminantium
Pathway
srq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:srq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SR187_8200 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:srq03400]
    SR187_8200 (uvrA)
DNA repair and recombination proteins [BR:srq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SR187_8200 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SR187_8200 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 RsgA_GTPase AAA_21 AAA_22 nSTAND3 AAA_33 BCA_ABC_TP_C NACHT AAA_14 Viral_helicase1 AAA_25 DUF87 cobW T2SSE MMR_HSR1 NB-ARC DnaJ_CXXCXGXG Septin DUF4350 RACo_linker DUF463 MeaB NTPase_1 FtsK_SpoIIIE RNA_pol_Rbc25 SF3a60_Prp9_C
Other DBs
NCBI-ProteinID: BBA93243
UniProt: A0A2Z5U518
LinkDB
Position
complement(1684906..1687731)
AA seq 941 aa
MQENIIIHGARAHNLKNIDVTIPREKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSA
YARQFLGNMDKPDVDSIEGLSPAISIDQKTTSRNPRSTVGTATEINDYLRLLYARVGVPY
CIHGHGAIAASSVEQIVDEVLELPERQRLQILAPVVRRKKGQHKTILEKIQRDGYVRVRV
NGEVYDLSEVPELSKSRAHTIEVVVDRIVVKEGIRTRLFDSIEAALRLADGYVLIDTMDG
KEMLFSEHYACPVCGFTVPELEPRLFSFNAPFGSCSDCDGLGTKLEVDLDLIVPDTSKTL
REGALAPWNPISSNYYPQMLEQAMNHFGVDMDKPFEELTDDEKNLIFYGSNGKEFHFHYE
NEFGGVRDIDIPFEGLVINIDRRYRETNSDYTRTVMKSYMNELTCGTCHGYRLNDQALSV
KVGGEKGFHIGQLSDLSVADHLEVLSQLTLSANEATIATPIIKEIKDRLTFLNNVGLNYL
TLSRAAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIASLKKMRDLG
NTLIVVEHDEDTMREADWLIDIGPGAGVFGGEIVAAGTPAQVAKNKKSITGQYLSGKRQI
PVPLERRIGNGRFLEVTGAKENNLQDVTVRFPLGKFLAVTGVSGSGKSTLVNSILKKAIA
QKLNRNSDKPGKFESISGIEHLDRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVFVPCEVCHGHRYNSETLEVHY
KEKNIAQVLDMTVNDAVEFFKHIPKIERKLRTIQDVGLGYVTLGQPATTLSGGEAQRMKL
ASELHKRSTGKSLYILDEPTTGLHTEDIAQLLKVLARFVDDGNTVLVIEHNLDVIKTADY
IIDMGPEGGIGGGTVVATGTPEEVAENPASFTGQYLKMKLK
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgcaagaaaatattattattcatggtgcgcgtgcccataatttaaaaaatattgatgtg
acaattccacgtgaaaaattagtggtagtaaccggtttatctggttcaggaaagtcgagt
ttggcatttgataccttgtacgctgaaggacagcggcgctatgtggaaagtttgtccgcc
tacgcccgtcagtttttagggaatatggataagccagatgtggattcgattgaaggtctc
agtcctgctatctctattgatcaaaagactacatcacgaaatcctcggtcaacagttggg
acagcgacagaaatcaatgattatcttcgtctgctctatgctcgtgttggagtgccatac
tgtatccatggacacggagcgattgctgcttcttcagtggagcagattgttgatgaagtg
ttggaattgccagaacgccaacgtttgcaaattttagcgcctgtcgttcgtcgaaaaaag
gggcaacataagaccattcttgaaaaaatacagcgagatggctacgtccgagttcgtgtc
aatggtgaagtgtatgatctgtcagaagtgccagaattgtccaagagcagggcacatact
attgaagttgtagtcgataggattgttgttaaagaaggcattcgcactcgtctctttgac
tctattgaagcagctctgcgactggcagatggttatgtcctcattgatactatggatggc
aaagaaatgctcttttctgagcattacgcttgtccagtttgtggttttacagtccctgag
ttagagcctcgtctattctcgttcaatgcgccatttggctcttgtagcgattgtgatggt
ctaggtacgaaattagaggtggatctggatttgattgtcccagacacaagtaagactctg
cgtgagggtgctttggcgccatggaatccaatttcttctaactactatccccaaatgctg
gaacaggctatgaatcattttggcgtagatatggataagccttttgaagagttgacagat
gacgagaagaatcttattttttacggttctaatggcaaggaattccatttccattatgaa
aatgagtttggtggtgtgagagatattgatattccttttgaggggttagttataaatatt
gatcgtcgctaccgtgaaaccaatagtgactatacacggacggtcatgaagagctatatg
aatgaactgacctgtggaacctgtcatgggtatcgactcaatgatcaggccttgtctgta
aaggtcggtggtgaaaaaggttttcatatcggacagttatcggatttatcggtagctgat
catttggaagttctatctcagttgaccttgtctgccaacgaagccactattgcaactccc
atcatcaaagaaatcaaggatagattgacatttcttaataatgttggactgaactatcta
accctttctcgagcagcgggtacactttcaggtggggaaagccagcgaattcgtctggca
actcagattggttcaaacctatcaggtgttctttatattcttgatgagccttccattggc
ttgcatcagcgggacaatgatcgccttattgccagtctcaagaagatgcgagatttgggc
aataccttgattgtggtagaacacgatgaagatactatgcgcgaggcggactggttgatt
gatattggtccaggtgcaggtgttttcggcggtgaaatcgttgctgccggaactcctgca
caagtggcaaagaataaaaaatccattacgggtcaatatttatctggcaagcgtcaaatc
ccagttcccttagaacgtcgtattggtaatggtcgtttcttagaagtcactggcgctaag
gagaacaacctgcaagatgtgaccgttcgtttcccccttggtaaatttttggcggtgaca
ggagtgtctggctctggtaaatcaactctcgttaactccattttgaaaaaagccattgcc
cagaagctcaatcgcaattcggacaagccaggcaagtttgagtcgatttcaggaattgaa
cacttggatcgtttgattgacattgaccaaagtccgattggacggacaccgcgttccaac
cctgctacttatacaggtgtttttgatgatattcgtgatctatttgctcagacaaatgaa
gcgaagattcgtggttataaaaaggggcgtttctcctttaacgtcaaaggtggacggtgt
gaagcctgttcaggagacggtatcatcaagattgaaatgcactttctgccggatgtcttt
gttccatgtgaggtttgtcatgggcatcgttacaattcagaaacgctagaggttcattac
aaagaaaagaacattgctcaagtccttgatatgacggtcaatgatgcggtggaattcttc
aagcatataccgaaaattgagcgaaagctccgtactatccaggatgtaggtctaggttat
gtaaccttgggccaaccggcaacgactctatctggtggtgaggctcagcggatgaagttg
gcttcggagctccacaagcgttcaactggcaagtctctttatattctggatgagccgaca
acaggtcttcatacggaggacattgcccaactgctcaaagttttggctcgtttcgtggat
gatggtaataccgtcctggtcatcgaacataatttggatgtgataaagactgctgattat
atcattgatatgggtccggaaggtggtatcggtggtggtactgtcgttgcgacaggtacc
ccagaagaagttgcagaaaatccagctagctttacaggacagtatctgaaaatgaagttg
aaataa

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