Streptococcus ruminantium: SR187_8200
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Entry
SR187_8200 CDS
T05916
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit
KO
K03701
excinuclease ABC subunit A
Organism
srq
Streptococcus ruminantium
Pathway
srq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
srq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SR187_8200 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srq03400
]
SR187_8200 (uvrA)
DNA repair and recombination proteins [BR:
srq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SR187_8200 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SR187_8200 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
RsgA_GTPase
AAA_21
AAA_22
nSTAND3
AAA_33
BCA_ABC_TP_C
NACHT
AAA_14
Viral_helicase1
AAA_25
DUF87
cobW
T2SSE
MMR_HSR1
NB-ARC
DnaJ_CXXCXGXG
Septin
DUF4350
RACo_linker
DUF463
MeaB
NTPase_1
FtsK_SpoIIIE
RNA_pol_Rbc25
SF3a60_Prp9_C
Motif
Other DBs
NCBI-ProteinID:
BBA93243
UniProt:
A0A2Z5U518
LinkDB
All DBs
Position
complement(1684906..1687731)
Genome browser
AA seq
941 aa
AA seq
DB search
MQENIIIHGARAHNLKNIDVTIPREKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSA
YARQFLGNMDKPDVDSIEGLSPAISIDQKTTSRNPRSTVGTATEINDYLRLLYARVGVPY
CIHGHGAIAASSVEQIVDEVLELPERQRLQILAPVVRRKKGQHKTILEKIQRDGYVRVRV
NGEVYDLSEVPELSKSRAHTIEVVVDRIVVKEGIRTRLFDSIEAALRLADGYVLIDTMDG
KEMLFSEHYACPVCGFTVPELEPRLFSFNAPFGSCSDCDGLGTKLEVDLDLIVPDTSKTL
REGALAPWNPISSNYYPQMLEQAMNHFGVDMDKPFEELTDDEKNLIFYGSNGKEFHFHYE
NEFGGVRDIDIPFEGLVINIDRRYRETNSDYTRTVMKSYMNELTCGTCHGYRLNDQALSV
KVGGEKGFHIGQLSDLSVADHLEVLSQLTLSANEATIATPIIKEIKDRLTFLNNVGLNYL
TLSRAAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIASLKKMRDLG
NTLIVVEHDEDTMREADWLIDIGPGAGVFGGEIVAAGTPAQVAKNKKSITGQYLSGKRQI
PVPLERRIGNGRFLEVTGAKENNLQDVTVRFPLGKFLAVTGVSGSGKSTLVNSILKKAIA
QKLNRNSDKPGKFESISGIEHLDRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVFVPCEVCHGHRYNSETLEVHY
KEKNIAQVLDMTVNDAVEFFKHIPKIERKLRTIQDVGLGYVTLGQPATTLSGGEAQRMKL
ASELHKRSTGKSLYILDEPTTGLHTEDIAQLLKVLARFVDDGNTVLVIEHNLDVIKTADY
IIDMGPEGGIGGGTVVATGTPEEVAENPASFTGQYLKMKLK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaatattattattcatggtgcgcgtgcccataatttaaaaaatattgatgtg
acaattccacgtgaaaaattagtggtagtaaccggtttatctggttcaggaaagtcgagt
ttggcatttgataccttgtacgctgaaggacagcggcgctatgtggaaagtttgtccgcc
tacgcccgtcagtttttagggaatatggataagccagatgtggattcgattgaaggtctc
agtcctgctatctctattgatcaaaagactacatcacgaaatcctcggtcaacagttggg
acagcgacagaaatcaatgattatcttcgtctgctctatgctcgtgttggagtgccatac
tgtatccatggacacggagcgattgctgcttcttcagtggagcagattgttgatgaagtg
ttggaattgccagaacgccaacgtttgcaaattttagcgcctgtcgttcgtcgaaaaaag
gggcaacataagaccattcttgaaaaaatacagcgagatggctacgtccgagttcgtgtc
aatggtgaagtgtatgatctgtcagaagtgccagaattgtccaagagcagggcacatact
attgaagttgtagtcgataggattgttgttaaagaaggcattcgcactcgtctctttgac
tctattgaagcagctctgcgactggcagatggttatgtcctcattgatactatggatggc
aaagaaatgctcttttctgagcattacgcttgtccagtttgtggttttacagtccctgag
ttagagcctcgtctattctcgttcaatgcgccatttggctcttgtagcgattgtgatggt
ctaggtacgaaattagaggtggatctggatttgattgtcccagacacaagtaagactctg
cgtgagggtgctttggcgccatggaatccaatttcttctaactactatccccaaatgctg
gaacaggctatgaatcattttggcgtagatatggataagccttttgaagagttgacagat
gacgagaagaatcttattttttacggttctaatggcaaggaattccatttccattatgaa
aatgagtttggtggtgtgagagatattgatattccttttgaggggttagttataaatatt
gatcgtcgctaccgtgaaaccaatagtgactatacacggacggtcatgaagagctatatg
aatgaactgacctgtggaacctgtcatgggtatcgactcaatgatcaggccttgtctgta
aaggtcggtggtgaaaaaggttttcatatcggacagttatcggatttatcggtagctgat
catttggaagttctatctcagttgaccttgtctgccaacgaagccactattgcaactccc
atcatcaaagaaatcaaggatagattgacatttcttaataatgttggactgaactatcta
accctttctcgagcagcgggtacactttcaggtggggaaagccagcgaattcgtctggca
actcagattggttcaaacctatcaggtgttctttatattcttgatgagccttccattggc
ttgcatcagcgggacaatgatcgccttattgccagtctcaagaagatgcgagatttgggc
aataccttgattgtggtagaacacgatgaagatactatgcgcgaggcggactggttgatt
gatattggtccaggtgcaggtgttttcggcggtgaaatcgttgctgccggaactcctgca
caagtggcaaagaataaaaaatccattacgggtcaatatttatctggcaagcgtcaaatc
ccagttcccttagaacgtcgtattggtaatggtcgtttcttagaagtcactggcgctaag
gagaacaacctgcaagatgtgaccgttcgtttcccccttggtaaatttttggcggtgaca
ggagtgtctggctctggtaaatcaactctcgttaactccattttgaaaaaagccattgcc
cagaagctcaatcgcaattcggacaagccaggcaagtttgagtcgatttcaggaattgaa
cacttggatcgtttgattgacattgaccaaagtccgattggacggacaccgcgttccaac
cctgctacttatacaggtgtttttgatgatattcgtgatctatttgctcagacaaatgaa
gcgaagattcgtggttataaaaaggggcgtttctcctttaacgtcaaaggtggacggtgt
gaagcctgttcaggagacggtatcatcaagattgaaatgcactttctgccggatgtcttt
gttccatgtgaggtttgtcatgggcatcgttacaattcagaaacgctagaggttcattac
aaagaaaagaacattgctcaagtccttgatatgacggtcaatgatgcggtggaattcttc
aagcatataccgaaaattgagcgaaagctccgtactatccaggatgtaggtctaggttat
gtaaccttgggccaaccggcaacgactctatctggtggtgaggctcagcggatgaagttg
gcttcggagctccacaagcgttcaactggcaagtctctttatattctggatgagccgaca
acaggtcttcatacggaggacattgcccaactgctcaaagttttggctcgtttcgtggat
gatggtaataccgtcctggtcatcgaacataatttggatgtgataaagactgctgattat
atcattgatatgggtccggaaggtggtatcggtggtggtactgtcgttgcgacaggtacc
ccagaagaagttgcagaaaatccagctagctttacaggacagtatctgaaaatgaagttg
aaataa
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