Streptococcus ruminantium: SR187_9200
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Entry
SR187_9200 CDS
T05916
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
srq
Streptococcus ruminantium
Brite
KEGG Orthology (KO) [BR:
srq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srq03019
]
SR187_9200
Messenger RNA biogenesis [BR:
srq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SR187_9200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
BBA93442
UniProt:
A0A2Z5TYN8
LinkDB
All DBs
Position
complement(1884778..1885719)
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AA seq
313 aa
AA seq
DB search
MKINQMKKDEFFEGFYLIKTAEVRQTRAGKDYLALTFQDDTGEIEGKVWDAQPGKIKDFT
AGTVVHMQGRREVYNNTPQVNQLVLRLPRVGEPNDPADFKEKPPVDVKETKDYLNQMIFR
IENAIWQRIVRALYSKYDKEFYSYPAAKTNHHAFYSGLAFHTATMVRLAEKIGDIYPQLN
KSLLFAGIMLHDLAKVIELTGPDNTSYTVRGNLIGHISLIDEEITKVLIELGIDDSLEEV
IVLRHVILSHHGLLEYGSPVRPQIMEAEILHMIDNIDAEMMMMLSALDKVGPGEVTNRIF
AMDNRTFYKPNID
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaccaaatgaaaaaagatgaattctttgaaggattttatctcataaaaaca
gcggaagtccgtcaaacgcgggctggaaaagattatttagctcttacctttcaggatgat
acgggagaaattgaaggcaaggtttgggatgcacagcctgggaagattaaggactttacg
gctggaacagtagttcatatgcaaggccgcagagaagtttataataatacgcctcaagtc
aatcaattagtgcttcgcttgccaagggtaggagagccaaacgaccctgcagattttaag
gaaaaacctcctgttgatgtcaaggaaacaaaggactatctgaatcagatgatttttcgt
atcgaaaatgccatctggcaacggattgtccgagctctttacagcaagtatgataaggaa
ttttattcatatccagcagctaaaaccaaccatcatgccttctattcaggtctagctttt
catactgcaaccatggtgcgcttggcagagaaaattggtgatatttatccccagctcaat
aaaagtctgctttttgctggtatcatgctccatgatttagctaaggttattgaattgact
ggtccggataatacaagttacactgttcgtggtaatctcattggacatatttccttaatt
gatgaagaaatcaccaaggtcttgatcgagctggggattgatgatagtctggaagaagta
attgtgttgcgtcatgttattctcagtcatcacggtctattggagtacggtagtcctgtt
cgtccacaaattatggaggcggaaatccttcatatgattgataatattgatgcagaaatg
atgatgatgctatctgctttagacaaagtaggaccgggtgaggtaaccaaccgcatcttt
gccatggataatcggaccttttataagcctaatattgactaa
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