Serratia plymuthica AS9: SerAS9_0062
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Entry
SerAS9_0062 CDS
T01503
Name
(GenBank) transcriptional regulator, AraC family
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
srr
Serratia plymuthica AS9
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srr03000
]
SerAS9_0062
Transcription factors [BR:
srr03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SerAS9_0062
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBP1_XylR
Peripla_BP_3
HTH_AraC
HTH_18
Peripla_BP_4
Peripla_BP_6
H2O2_YaaD
Motif
Other DBs
NCBI-ProteinID:
AEF43227
LinkDB
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Position
70596..71774
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AA seq
392 aa
AA seq
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MFAKRFRITLLFNANKVYDRQVVEGVGEYLQASQCDWDIFIEEDFRCRIDNIKDWLGDGV
IADYDDREIERLLHNVNVPIVGVGGSYHREEDYPPVHYIATDNQALVEAAFMHLKEKGIN
RFAFYGLPAEGGKRWAQEREQAFRQRVAAEQYQGVVYQGMATAPENWQYAQNRLADWVQT
LPQQTGIIAVTDARARHLLQVCEHLDIAVPEKLCVIGIDNEELTRYLSRVALSSVAQGTR
QMGYRAAKLLHQLLDRRELPLQRILVPPVKVIERRSTDFRSLRDPAVIQAMHYIRHHACK
GIKVEQVLDAVGMSRSNLEKRFRDETGETIHHMIHQEKLERARNLLTATSLTINEISQMC
GYPSLQYFYSVFKKGYDATPKEYRERHGETGY
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcgaagcgctttcgcattacgttactgttcaacgccaataaagtgtatgaccgc
caggtggtcgagggcgtcggcgagtatttacaggcttcacagtgtgactgggacatcttt
atcgaagaggattttcgctgccgcatcgacaacatcaaggactggttgggcgatggggtg
atcgccgattacgacgatcgcgagattgagcggttgctgcataacgtcaatgtgccgatc
gtcggcgttggcggctcctatcaccgtgaggaggactacccgccggtgcactatatcgcc
accgataatcaggcgctggtggaggcggcgtttatgcacctgaaggagaaggggatcaat
cgctttgctttttacggcctgccagcggaaggcggcaaacgctgggcgcaggagcgcgaa
caggctttccgtcaacgggtggcggcggagcaatatcagggcgtggtgtatcagggcatg
gccaccgcgccggagaactggcagtacgcgcagaaccggctggcggattgggtgcagacc
ctgccgcagcagaccggcatcatcgccgtgaccgacgcgcgggcgcgccatttgctgcag
gtgtgcgagcacctggatatcgcggtgccggagaaactctgcgtgatcggcatcgataac
gaagagctgacgcgctacctgtcgcgggtggcgctgtcgtcggtggcgcagggcacccgg
cagatgggttaccgcgccgccaagctgctgcatcagttgctggaccgccgcgaactgccg
ctgcaacgtatcctggtgccgccggtgaaggtgattgaacgccgctccaccgatttccgc
tcgctgcgcgatccggcggtgattcaggccatgcattacatccgtcatcacgcctgcaag
ggcatcaaggtcgagcaggtgctggatgcggtcggcatgtcgcgttccaacctggaaaaa
cgcttccgggacgagaccggcgaaaccatccaccatatgatccatcaggaaaagctggag
cgcgcccgtaatctgctgacggcgacctcgctgaccatcaacgagatctcgcagatgtgc
ggctacccgtcgttgcaatatttctattcggtattcaaaaaaggctatgacgcaacgccc
aaagagtaccgtgagcgccacggtgaaaccgggtattag
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