Serratia plymuthica AS9: SerAS9_0246
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Entry
SerAS9_0246 CDS
T01503
Name
(GenBank) Phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
srr
Serratia plymuthica AS9
Pathway
srr00730
Thiamine metabolism
srr01100
Metabolic pathways
srr01240
Biosynthesis of cofactors
Module
srr_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SerAS9_0246
Enzymes [BR:
srr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
SerAS9_0246
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AEF43408
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Position
complement(284488..286431)
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AA seq
647 aa
AA seq
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MSNVKKPRARKEQREEAQQFIDTLQGVSFPNSHRIYLQGSRSDVLVPMREIQLSPTLIGG
DKDNPQYEQNEAIPVYDTAGPYGDPQSELDVHRGLAKLRAGWIEERGDTEALTGVSSGFT
QQRLADEGLDHLRFEHLPLPRKAQPGKCVTQLHYARAGIVTPEMEFIAIRENMGRERIRG
EVLRHQHPGQSWGANLPQNITPEFVRQEVAAGRAIIPANINHPESEPMIIGRNFLVKVNA
NIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQ
ALEKVNGVAESLTWEMFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSI
MAKWCLSHHQENFLYQHFREICEICATYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGE
LTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTS
GIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDN
AMSKARFEFRWEDQFNLALDPATARAYHDETLPQESGKIAHFCSMCGPKFCSMKISQEVR
DYAAAQEAAKPIEVQLTGMEKMSAEFRSRGSELYHSAGNLQGEMSNE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacgttaaaaaaccgcgcgcccgtaaagaacagcgcgaagaagcccagcagttt
atcgacactctgcaaggcgtatcctttcccaattcacaccgcatctatctgcaaggctca
cgcagcgatgtgctggtcccgatgcgtgaaatccagctcagcccgacgctgattggcggt
gacaaagacaacccgcaatacgagcagaacgaagctatcccggtatatgacaccgccggc
ccgtacggcgatccgcaatccgagctcgatgtgcatcgcggcctggcgaaactgcgcgcc
ggctggatcgaagaacgtggcgataccgaagccctcacaggcgtcagttccggattcact
cagcagcgcctggcggacgaagggttggatcatctgcgcttcgaacatctgccgctgccg
cgcaaggcgcaaccgggcaaatgcgtcacccagttgcactacgctcgcgccggcatcgtc
accccggaaatggaattcatcgccatccgcgaaaacatgggccgtgagcgtatccgcggc
gaagtactgcgccaccagcatccaggtcaaagctggggcgccaatctgccgcaaaacatc
acgccggaattcgttcgccaggaagtggccgccggccgcgccatcattcccgctaacatc
aaccacccggaatccgaaccgatgatcatcggccgtaacttcctggtgaaggtcaacgcc
aatatcggtaattcggcagtgacttcgtcaatcgaagaagaagtggagaagctggtgtgg
tccacccgctggggtgcggacaccgtgatggatttgtccaccggccgttatatccacgaa
acccgtgaatggatcctgcgtaacagcccggtgccgatcggcacggtacctatctatcag
gcgctggaaaaagtgaacggcgtggccgagagtctgacctgggaaatgttccgcgatacg
ctgctggagcaggcggagcaaggcgtcgactacttcaccatccacgccggtgtgctgctg
cgttatgtgccgatgaccgccaaacgcctgaccggcatcgtctctcgtggcggttcgatc
atggccaagtggtgcctgtcgcatcatcaggaaaacttcctgtatcaacacttccgcgaa
atttgtgaaatctgcgccacctacgacgtatcgctgtcgctgggtgacggcctgcggccc
ggctcgattcaggacgccaacgacgaagcacagttcgctgagctgcacacgctgggagaa
ctgacaaaaatcgcttgggaatatgacgtgcaagtgatgatcgaaggcccaggccacgtg
ccgatgcagatgatccgccgcaacatgaccgaagagctggaacactgtcacgaagcgccg
ttctataccttaggcccgttgaccaccgatatcgcacccggttatgaccacttcacctcc
ggcataggggccgcgatgatcggctggttcggctgcgctatgctgtgttacgtcacaccg
aaggaacacctcggcctgccaaacaaagaagacgtgaagcagggattgatcacctataag
atcgccgcccatgctgctgacctggccaaaggccacccaggtgcgcaaatccgtgataac
gccatgtccaaagctcgcttcgaattccgctgggaagatcagttcaatctggcgctcgat
cccgccaccgcccgtgcctatcacgacgaaaccctgccgcaggagtccggcaaaatcgcc
catttctgctcaatgtgcgggccgaagttctgctcgatgaagatctcgcaagaggtccgc
gactacgccgccgcgcaggaagcggccaagccgatagaggtgcagctgaccggtatggaa
aagatgtcggccgagttccgttcacggggtagcgagctgtaccacagcgccggtaacctt
cagggggagatgagcaatgaatga
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