Serratia plymuthica AS9: SerAS9_0428
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Entry
SerAS9_0428 CDS
T01503
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
srr
Serratia plymuthica AS9
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srr03021
]
SerAS9_0428
03009 Ribosome biogenesis [BR:
srr03009
]
SerAS9_0428
Transcription machinery [BR:
srr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
SerAS9_0428
Ribosome biogenesis [BR:
srr03009
]
Prokaryotic type
rRNA transcription factors
SerAS9_0428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
DUF4332
DUF6335
KH_NusA_C
KH_KhpA-B
IMS_HHH_1
KH_2
Motif
Other DBs
NCBI-ProteinID:
AEF43584
LinkDB
All DBs
Position
474526..476034
Genome browser
AA seq
502 aa
AA seq
DB search
MNKEILAVVEAVSNEKSLPREKIFEALETALATATKKKYEQEIEVRVSIDRKTGDFDTFR
RWVAVDEVTQPTREITLEAAQYEEPGIELGGYIEDQIESVTFDRITTQTAKQVIVQKVRE
AERAMVVDAFRQHEGEIVTGVVKKVNRDSIALDLGSNAEAVIGREDMLPRENFRPGDRIR
GILYAVRPEARGAQLFVSRSSAEMLKELFRIEVPEIGEEVIEIKAAARDPGSRAKIAVKT
NDKRIDPVGACVGMRGARVQAVSSELGGERIDIILWDDNPAQFVINAMAPADVASIVVDE
DNCTMDIAVEASNLAQAIGRNGQNVRLASQLLKQHRDDDRWELNVMTADDLQAKHQAEAH
AAIDTFTKYLDIDEDFATVLVEEGFSTLEELAYVPIKELLEIDGLDEDMVEALRDRAKAA
LTTLALAQEESLGDQKPADDLLNLPGLERSMAFKLAARGVCTLEDLAEQGVDDLADIEGL
SDEQAGELIMAARNICWFGDNA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagattctggctgttgttgaagctgtttccaacgaaaaatcccttccgcgt
gagaagattttcgaagcgttggaaaccgcattagccaccgcaaccaagaaaaaatacgag
caggaaattgaggttcgcgtcagtatcgatcgcaaaaccggcgatttcgataccttccgt
cgttgggtcgccgtagatgaagtgacccagccaacgcgtgaaatcacgctggaagccgct
cagtatgaagagccgggcatcgagttgggcgggtacatcgaagatcagatcgaatctgtg
acctttgaccgtatcaccacccaaaccgcgaaacaggttatcgtacaaaaagtacgtgaa
gccgaacgcgccatggtcgttgacgctttccgtcagcacgaaggtgaaatcgtcaccggc
gtggtgaagaaagtaaaccgtgacagcattgcgctggacctgggcagcaacgccgaagcg
gtcattggccgtgaagacatgctgccgcgcgaaaacttccgtccgggcgaccgaattcgc
ggcatattgtacgccgtccgtcctgaagctcgtggcgcacagctgttcgtcagccgttcc
agcgcagagatgctgaaagaactgttccgcatcgaagtgccggaaatcggcgaagaagtg
attgaaattaaagcggcagcccgtgatcctggctcccgtgcaaaaattgctgtgaaaacc
aacgacaaacgcatcgacccggtcggcgcttgcgtaggtatgcgcggtgcgcgcgttcag
gccgtttcgagcgaactcggcggcgaacgtatcgatatcatcctctgggatgataaccct
gcgcagttcgtcatcaacgccatggcgccggcagacgttgcctcgatcgtggttgatgaa
gataattgcaccatggatatcgccgtcgaagccagcaacctggcacaggcgatcggccgt
aatggccaaaacgtgcgtttggcttcccaattgttaaaacaacatcgtgacgatgatcgt
tgggaactgaacgtgatgacggcggacgatctgcaggccaagcaccaggccgaagctcat
gccgccattgataccttcaccaagtatcttgatatcgacgaagatttcgccaccgtactg
gtcgaagaaggcttctctactctggaagagttggcttacgtgccaatcaaagagctgctg
gaaattgacggtctggatgaagatatggttgaagcgttgcgcgatcgcgccaaagctgca
ttgaccacgcttgccctggcccaagaagagagcctgggcgaccaaaaacctgctgacgat
ttgctcaaccttccggggcttgagcgcagcatggcctttaaactggccgcgcgtggggtt
tgtacgctggaagatcttgccgagcagggtgttgacgatctggcggatattgaagggctt
agcgatgagcaagccggcgagctgattatggccgcacgtaatatctgttggtttggcgac
aacgcgtaa
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