Serratia plymuthica AS9: SerAS9_0431
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Entry
SerAS9_0431 CDS
T01503
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
srr
Serratia plymuthica AS9
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srr03016
]
SerAS9_0431
Enzymes [BR:
srr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SerAS9_0431
Transfer RNA biogenesis [BR:
srr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SerAS9_0431
Prokaryotic type
SerAS9_0431
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AEF43587
LinkDB
All DBs
Position
479225..480169
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGLSSNDALQKVKRLYNANRAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYRVIAKLGQRTDTSDADGQIVQERPVNFTQTQLDTALDSFRGDIK
QVPSMYSALKYQGKKLYEYARQGIEVPREARSITVYELQFIRWEGDELELEIHCSKGTYI
RTITDDLGELLGCGAHVIYLRRLQVATYPIERMVTLEQLNALLEQAQAREIAPGELLDPL
LMPMDSPVENYPEVNLLPVVAGYVKQGQPVQVAGAPASGMVRMTEGEERKFIGVGDIADD
GRVAPRRLVVEHFD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgccctcgtcgccgcggccgtgatatccacggtgtcctgttgctggacaaaccg
caggggctgtcgtccaacgacgctctgcaaaaagtgaaacgcctttataacgccaatcgc
gcgggccacactggcgcgctcgatccgctggcgacaggcatgctgccgatttgcctgggt
gaggcgaccaagttctcgcaattcctgctcgattccgataaacgctatcgtgtcattgcc
aagctgggtcagcgtaccgacacctcggatgcggacggccagattgtgcaagagcgcccg
gtgaatttcacccagacgcaactcgatacggcgctggacagtttccgcggcgatatcaag
caagtgccgtcgatgtactcggcgctgaagtaccagggcaagaaactctacgagtatgcg
cgccagggtatcgaagtgccgcgtgaagcgcgcagcattacggtttatgaactgcagttt
attcgctgggaaggcgatgaactggagttggaaattcactgttcgaaaggcacctacatc
cgcaccatcaccgatgatctcggtgaactgttgggctgcggcgcgcacgtgatctatctg
cgtcgtttgcaggtagcgacttatccgatcgaacgcatggtcacgcttgagcagttgaac
gcgttgctggagcaagctcaagcgcgggaaatcgcgcctggcgagttgctcgatccgttg
ctgatgccgatggacagcccggtagagaactacccggaagtgaatttgctgccggttgtt
gcgggttacgtcaagcaggggcagccggtacaggttgctggcgcaccggcctcgggcatg
gtgcgaatgaccgaaggtgaagagcgtaaatttatcggcgtaggtgacatcgccgatgac
ggtcgcgtagcgccgcgccgcctggtggtcgaacatttcgactga
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