Serratia plymuthica AS9: SerAS9_0752
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Entry
SerAS9_0752 CDS
T01503
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
srr
Serratia plymuthica AS9
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srr03016
]
SerAS9_0752
Enzymes [BR:
srr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
SerAS9_0752
Transfer RNA biogenesis [BR:
srr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SerAS9_0752
Prokaryotic type
SerAS9_0752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AEF43905
LinkDB
All DBs
Position
847368..848414
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AA seq
348 aa
AA seq
DB search
MDMANLTWLYGQPQSTGVLKASPEDFVVVEDLGFEPDGEGEHVLVNIRKNGCNTQFVADY
LARFAGIHARSVSYAGLKDRHAVTEQWFCLHLPGKETPDFSQFSLEGCEVLASARHLRKM
RIGTLKGNAFTLVLRQISDRQDVEQRLQAIAAGGVPNYFGSQRFGRGGNNLVMARRWAND
EIRVKERSKRSFYLSASRSALFNLIASRRLANQQHRTVLEGDALQLTGRGSWFVAKPDEL
AELQQRLDAGELLITAPLPGDGEPGTAGEALNVEQQCLAEQPELMALLKRERVDPARRAL
LLQPQKIQWNWWDDATVELRFWLPAGSFATSVVREIMRQDSSDADISE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggacatggctaatttgacctggctgtacggccagccgcaaagcaccggggtgctgaaa
gccagcccggaagatttcgtggtggtggaagatctgggctttgagccggacggagaaggc
gaacatgtgctggtgaacatccgcaagaacggatgtaacacccagtttgtcgccgattat
ctggcacgtttcgccggcattcacgcccgttcggtcagctacgccggcctgaaagatcgc
catgcggtgacagaacagtggttctgcctgcatctgccgggcaaagaaacgcctgatttc
agccagttctcgctggagggctgcgaagtgctggccagtgcccgccatctgcgaaaaatg
cgcatcggtacgctgaaaggcaatgcttttactctggtgctgcgtcagatctccgatcgt
caggatgtagagcagcgcctgcaggccattgctgcgggtggcgtgccgaactatttcggc
agccagcgttttggtcgcggtggcaataacctggtcatggcgcgccgctgggcgaatgat
gagatccgggttaaagagcgcagcaagcgcagtttttacctttccgccagccgcagcgcg
ctatttaacctgatcgccagccgacgcttggccaatcaacagcaccgcacggtgctggaa
ggggatgcgctgcaactgactggccgcggcagttggtttgtcgccaaaccggacgaactg
gctgagttgcagcagcggctggatgccggtgaactgttgattaccgcgccgttgccgggc
gacggcgaaccgggtaccgccggggaagcgctgaacgttgaacagcaatgtttggcggaa
cagccggagctgatggcgttgttaaagcgcgaacgcgttgatccggctcgtcgcgcgctg
ctgctgcaaccgcaaaagatacagtggaattggtgggatgatgccaccgttgaattgcgc
ttttggctgccggccggcagttttgccaccagcgtggtgcgcgaaatcatgcggcaagat
agcagtgatgcggacattagcgagtaa
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