Serratia plymuthica AS9: SerAS9_0836
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Entry
SerAS9_0836 CDS
T01503
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
srr
Serratia plymuthica AS9
Pathway
srr03030
DNA replication
srr03430
Mismatch repair
srr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SerAS9_0836
03430 Mismatch repair
SerAS9_0836
03440 Homologous recombination
SerAS9_0836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srr03032
]
SerAS9_0836
03400 DNA repair and recombination proteins [BR:
srr03400
]
SerAS9_0836
Enzymes [BR:
srr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SerAS9_0836
DNA replication proteins [BR:
srr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SerAS9_0836
DNA repair and recombination proteins [BR:
srr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SerAS9_0836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AEF43988
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All DBs
Position
935265..936005
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AA seq
246 aa
AA seq
DB search
MISTTTRQIVLDTETTGMNKLGVHYEGHRIIEIGAVEVINRRLTGRHYHVYVKPDRLVDP
EAYGVHGISDEFLADKPTFDQIADEFIEFIRGGELVIHNASFDIGFMDHEFRMLQKGLPK
TDTFCTITDSLLMARRLFPGKRNNLDALCGRYEIDNSKRTLHGALLDAEILAEVYLAMTG
GQTSMAFQMEGDTQHNDSTQDIQRIVRPATAMKVVYASDAEVVAHEARLDLVAKKGGSCL
WRAEAE
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgatctctacaaccaccagacaaattgtcctcgataccgaaaccaccggtatgaacaaa
ctcggggtgcattacgaaggccaccgcatcattgaaattggcgcagtggaagtgatcaac
cgtcgcctgaccggccgccactatcacgtttacgtcaaacccgatcggctggtggatcct
gaagcctacggggttcacggcatcagcgatgagttcctggcggataaacccacgttcgac
caaatcgctgatgagttcatcgagttcatccgtggcggtgagttagtcattcataatgcg
tcgttcgacatcggctttatggatcacgaattccgcatgttgcagaaggggctgccgaag
accgacaccttctgtaccatcaccgacagcctgttgatggcgcgccgcctgttcccgggc
aagcgcaacaaccttgatgccctgtgcggccgttatgagatagacaacagcaagcgtacg
ctgcacggcgcattgctcgatgccgagatcctggcggaagtttatctggcgatgaccggc
ggccagacgtcgatggcgtttcagatggaaggcgacacgcagcataacgactcgacgcag
gatatacagcggattgtgcgtccggcgacggcgatgaaagtggtctatgccagcgatgcg
gaagtggtggcccatgaggcgcgactggatttggtggcgaaaaagggcggcagttgcctg
tggcgtgcggaagcggaataa
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