Serratia plymuthica AS9: SerAS9_0964
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Entry
SerAS9_0964 CDS
T01503
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
srr
Serratia plymuthica AS9
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srr03400
]
SerAS9_0964
DNA repair and recombination proteins [BR:
srr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SerAS9_0964
Archaeal homologous recombinant proteins
SerAS9_0964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
ABC_tran
DUF5798
cobW
AAA_21
TsaE
AAA_14
NTPase_1
AAA_22
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
AEF44115
LinkDB
All DBs
Position
complement(1064045..1067299)
Genome browser
AA seq
1084 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVTPSQNELMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNAPDGNLQAPKVELALRED
GKILADKVRDKLDLTAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGQLSERVFEQHKQAKADLDALHQRASGIELLNDEQRQQLESQLVELSAQETALSGQARQ
QQQALNWLQQWQQTQLRQQEYQRQLSVVQQEQAAAEPQLQQLARSEPAEKLRPLHNDRHR
CRSEQQALQQQIAQMAQQQEHQLAQMAPLQQAVEKARAEQQAQAERQQTQQRLIDEQIVP
LDHQIAQLQKTQTELQQACDNAARQCHQQKTDLEQLNVQRSQLTAQAGQHREKLNGLTAA
LMAQQQQQNALEAQSPLAALRQRQTALAELRPARQQLFTLSSLFRQTNERLEQQRKEFTA
RQAQLGEHEQQLEETRRHYKQQKAHQLDVEKAFELEKRIVSLEAERALLQSGEPCPLCGS
ASHPAIEQYQAVKPSETALRLAEMRVKTEALYTQGTELRTRCESLKEQQQRQQQQIAQDE
RQLAAQRQQWQTLSAPLAFDFDLQDAGRLSQWLNACDSEERQGQQELSQHEQAARAVQQA
KDALAELQTQQQQAQQQQALLDERFTLLEKNHADAQLQQQRLQQQWQEGEKTLGEQRAQR
LALFGEQHIPQVREQLRAQLTACEQASHQAAEQWQKAQEQRDRLAGQLAGLQQQQQRQSE
RLQQAEQTWLETLAASEFSDEAAFSAALLDDAQRRQLQQHKEQLHQRQVEASALLAQAVH
TLEQQRQQRPEGLDETQADAQALSQSLEALAQQLKTVQLRQGEVRNQLESDAARRLNQQS
LFEQISQSQQQYDDWSYLNQLIGSKEGDKFRKFAQGLTLDHLVYLANNQLGRLHGRYLLQ
RKTSDALELQVVDTWQADALRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEG
FGTLDAETLDTALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGISRLEPQF
RLES
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctgagcctgcggctgaagaacctcaattcattgcagggcgagtggaagatc
gatttcaccgccgagccttttgccagtaatgggctgttcgccatcaccgggccaaccggc
gcgggtaaaaccaccctgctggatgctatctgcctggcgctgtaccaccagacaccgcgc
ctcaacgtgacaccgagccaaaacgaactgatgactcgccacaccgccgaatcgctggct
gaggtcgaatttgaggtcaagggcgtcggctaccgcgccttctggagccaacgccgagcc
aaaaacgcgccggacggcaacctgcaagcgccaaaggtggaactggcactgcgtgaagac
ggtaaaatcctggcggataaagtccgcgacaagctggatctgaccgccgcgatcaccggg
ctggatttcggccgcttcaccaaatcgatgatgctgtcccaggggcagttcgccgccttc
ctcaatgccgatgccaatgaccgggccgaactgctggaagagctgaccggcaccgaaatc
tacggccagctttccgaacgggttttcgagcagcacaaacaggccaaagccgatctggac
gccttgcatcaacgcgccagcggcattgaactgctgaatgacgaacaacgtcagcaattg
gagagccagttagttgagctgagcgcgcaggaaaccgccctcagcggacaggcccggcaa
cagcaacaggcgctgaactggttgcaacagtggcagcaaacgcagctccggcagcaggaa
taccaacgccagttgagcgttgtgcaacaggagcaggctgcggccgaaccgcagttgcaa
cagttggcgcgcagcgaaccggctgagaaactgcggccgctgcataacgaccgtcaccgt
tgccgcagtgagcagcaggcgctgcaacagcagatcgcccaaatggcgcagcagcaggag
catcagcttgcgcagatggcgccattgcagcaggcagtggaaaaagcgcgcgccgagcaa
caggcgcaagccgaacgccagcagacccagcagcggctgatcgacgagcagatcgtcccg
ctcgaccaccagattgctcagttgcaaaaaacgcagacggaattgcagcaggcgtgcgac
aacgccgcccggcagtgccatcagcagaaaacggatctggagcagttaaacgttcaacgc
agccaactgaccgcacaggccgggcagcatcgggagaagcttaacggtcttaccgcagcg
ctgatggcgcagcaacaacagcaaaatgcgctggaagcgcagtcaccgctggcggcgctg
cgtcagcgtcagaccgcgttggccgagctgcgcccggcacgccagcaactgttcaccctc
tcctcgctgttccgccagaccaacgagcggctcgaacaacagcgcaaagagtttaccgcc
cgtcaggcgcagcttggcgaacatgagcaacagttggaagaaacccggcggcactacaag
cagcaaaaagcgcatcagttggacgtggaaaaagcctttgagctggaaaagcgtatcgtc
agcctggaagccgagcgggcgctgctgcaaagcggcgagccctgcccactgtgcggctcc
gccagccatccggccattgagcaatatcaggcggtaaaaccgtccgagacagcattgcgc
ctggcggaaatgcgcgtcaaaaccgaggcgctgtacactcagggcaccgaactgcgcacc
cgttgcgaaagcctgaaggaacagcaacagcgccaacaacagcaaatagcgcaggacgag
cggcaactcgccgcccagcgccaacagtggcaaaccctcagcgcgccgctggcgtttgat
ttcgatctgcaagatgccgggcgcctgagccagtggctgaatgcctgcgacagcgaagag
cgccagggccagcaagagctgtcacagcatgagcaggcagcacgcgcggtacagcaggcg
aaagatgcactggccgagctccagacgcagcaacagcaggcgcaacagcaacaagcgctg
ctggacgagcgcttcaccctgctggaaaaaaaccacgccgacgcgcagttgcaacagcag
cgcctgcagcaacagtggcaagagggcgagaaaaccctgggcgagcaacgcgcgcagcga
ctggctctgtttggcgaacaacacattccgcaggtgcgcgaacagctgcgtgcccaactg
accgcctgcgagcaggccagccatcaggcagcggaacaatggcagaaagctcaggagcag
cgcgatcgcctggccggccagcttgccggcctgcaacagcaacaacaacggcagagcgaa
cggttgcaacaagcggaacaaacctggctagaaacactggccgccagcgaattcagcgat
gaagccgctttcagcgccgcgctgttggatgacgcacagcgccggcaattgcagcagcac
aaagaacaactgcaccagcggcaggtggaggccagcgccctgctggcacaggcggttcat
acgctggaacaacagcggcaacagcgcccggaagggctggatgaaacccaggccgatgcg
caagccctgagccagagcctggaggcgttggcgcagcaattgaaaaccgtgcaactgcgc
cagggcgaagtgcgcaaccaattggaaagcgacgccgcacgccgtctcaatcagcaatcg
ctgtttgagcaaatcagccagagccagcagcagtacgatgactggagctacctcaatcag
ctgatcggctccaaagaaggcgataaattccgtaaatttgcccaagggctgacactggat
catctggtgtatctggccaataaccagcttgggcgactgcacggccgttatctgttgcaa
cgcaaaaccagcgacgcgctggaactgcaggtggtggatacctggcaagcggatgcgctg
cgtgatacccgcaccctgtccggcggcgaaagtttcctggtcagcctggcattggcgctg
gcgttgtctgatctggtcagccacaaaaccagcatcgactcgctgtttctcgacgaaggc
ttcggcacgctggatgcggaaaccctggataccgcgctggacgcgctcgacagcctgaat
gcctccggtaaaaccatcggcgtgatcagccatgtcgaagcgatgaaagaacgcattccg
gtgcagattaaggtgaaaaaggtcaacggactgggtatcagccggctggagccgcagttt
cggctggaaagttag
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integrated database retrieval system
