Serratia plymuthica AS9: SerAS9_1063
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Entry
SerAS9_1063 CDS
T01503
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
srr
Serratia plymuthica AS9
Pathway
srr03030
DNA replication
srr03430
Mismatch repair
srr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SerAS9_1063
03430 Mismatch repair
SerAS9_1063
03440 Homologous recombination
SerAS9_1063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srr03032
]
SerAS9_1063
03400 DNA repair and recombination proteins [BR:
srr03400
]
SerAS9_1063
Enzymes [BR:
srr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SerAS9_1063
DNA replication proteins [BR:
srr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SerAS9_1063
DNA repair and recombination proteins [BR:
srr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SerAS9_1063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_4
AAA
AAA_22
RuvB_N
AAA_5
AAA_18
AAA_14
AAA_16
AAA_assoc_2
ResIII
AAA_30
AAA_2
nSTAND3
TsaE
AAA_7
AAA_24
Mg_chelatase
RCF1-5-like_lid
PIF1
SKI
DUF7799
Motif
Other DBs
NCBI-ProteinID:
AEF44214
LinkDB
All DBs
Position
1168044..1169993
Genome browser
AA seq
649 aa
AA seq
DB search
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTTIARLLAK
GLNCETGITATPCGQCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPSHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
DQIRNQLETVLQAEKITSDQRALQLLARAADGSMRDALSLTDQAIAMGQGQVTTVTVSQM
LGTLDDEQPLAILEALVSADGEKVMAQVAQAASRGVDWENLLIETLALLHRIAMVQLLPS
VLDNHYAAIEQRLRELARTLPPTDVQLYYQTLLVGRKELAFAPDRRMGVEMTLLRALAFH
PKAVIPEPVAPVQMAPAQIAQPRAPSAQPPQFQDVPPPLGQAVPQNNQPANLPDATAQLL
KARTQLLRQGASTPKKNEPAAPGKARPANSALERLASVTERSQQRLAEKQVQEKPAKPEA
YRWRALTEPEPEPEPLATPKALRTALEHEKTPELSAKLVVESLERDPWAAEIDKLKIPKL
VQQLALNAVKQQLEPGKICLRLRSSQRHLNSPSAQKVLTDALSELHGSPVELTVVEDDNP
AERTPLEWRQAIYEEKLAQARQSIVADTNIQTLRRFFDADLDEESIRPL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggttcttgcccgtaagtggcgccctcaaacgtttgcagatgttgtcgga
caagaacacgtcctgacggcgctggctaacggcctctcgctggggcggattcatcacgcc
tatctgttttcaggcacgcgcggcgtgggtaaaaccaccattgcgcgcctgctggccaaa
ggcctgaactgtgaaaccggcatcaccgcgaccccgtgcggccaatgcgataactgccgc
gagattgagcaggggcgctttgtcgatctgatcgagatcgacgccgcgtccagaaccaag
gtggaagacacccgcgatctgctggataacgtccaatacgcgcccgcccgcggccgtttc
aaagtttacctgattgacgaagtgcacatgctctcgcgtcacagcttcaatgcgctgttg
aaaacgctggaagagccgccttcgcacgtgaagttcctgctcgcgaccaccgatccgcaa
aagctgccggtgaccattctgtcacgctgcctgcaattccatctcaaagcgctggatgtc
gatcagatccgcaaccaactggaaacggtgctgcaggcggagaaaatcaccagcgatcag
cgtgcattgcaactgttggcgcgcgccgccgacggcagtatgcgcgacgcgctcagcctg
accgaccaggcgattgccatggggcaaggtcaggtgacgaccgtcaccgtcagtcagatg
ctgggcacgctggacgacgaacagccgctggccatccttgaggcgctggtgagcgcagac
ggcgaaaaggtcatggcgcaggtcgcgcaggcggcttctcgcggcgtagattgggagaat
ttgctgatcgagacgctggcgctgttgcaccgcattgcgatggtgcaattgctgccgtcg
gtactggataatcattacgccgctattgaacaaaggctgcgtgaactggcgcgcaccttg
ccgccgacagacgtacagctttattaccaaacgttgctggtagggcgcaaagagctggct
tttgcgccggatcgccgcatgggggttgagatgaccctgctgcgtgcgttggcgtttcac
ccgaaagcggtgatcccggagccggtggcgccggtgcaaatggcccctgcgcagatagcg
cagccgcgggccccttctgcccagccgccacagtttcaggacgtgccaccgccgttaggg
caggccgtaccgcaaaacaatcaaccggcgaatttaccggatgccaccgcgcagttatta
aaagcgcgcacccaactgctgcggcagggagcatccacaccaaaaaagaatgagccggcg
gcgcctggaaaagcgcggccggcaaactcagcactggagcgcttggcttcagtgactgag
cgcagccagcagcgcctggcggaaaaacaggtgcaggaaaaaccggccaaaccggaagcc
taccgttggcgggcgttgaccgagccggaaccggagccggaaccgctggcgacgccgaaa
gcgttgcgcaccgcacttgagcatgagaaaacgcccgagctgtcggccaaactggtggtt
gagtcgctcgagcgtgacccctgggcggcagagatcgataagctgaaaatcccgaaactg
gtgcagcaactggcgttgaacgccgtgaaacaacagctggaaccaggcaaaatttgtctc
cgcctgcggtcttcgcagcgccatctgaattcgccttcggcgcagaaggtgctgactgac
gcgctcagcgagttgcacggcagcccggttgagttaaccgtggtggaagatgataatccg
gcggagcggactccgctggagtggcggcaagccatttatgaagaaaaactggcgcaggcg
cgtcagtccatcgttgcggataccaatatccagacactgcgccggttcttcgacgcggat
ctggatgaagagagtattcgccccctttaa
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