Serratia plymuthica AS9: SerAS9_1225
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Entry
SerAS9_1225 CDS
T01503
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
srr
Serratia plymuthica AS9
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srr03400
]
SerAS9_1225
Enzymes [BR:
srr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SerAS9_1225
DNA repair and recombination proteins [BR:
srr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SerAS9_1225
Prokaryotic type
SerAS9_1225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AEF44364
LinkDB
All DBs
Position
1342211..1343641
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AA seq
476 aa
AA seq
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MTTHLVWLRNDLRITDNKALHAACCDPAARVLAVFIATPGQWRQHEMAPRQAAFIHANLL
QVQQALADRGIPLVCHQCDDFSAAVDWLVAYCAQERVDALFYNRQYEFNELKRDQQAQRR
LSGQVICQSFDDSLLLPPGSVQTGGGEMYKIYTPFRKAFIQRLTESDVRSLPAPKLREGG
VLPVSAVPAAFDYPQAEVGVDFPAGEDAALQRLRAFCREQVQDYLQQRDFPAIAGTSSLS
PYLAIGVLSPRQCFNRLRAECPQVLENSDSGAFGWLNELIWREFYRHLMVAYPALCRHRP
FIEWTDKVRWQDNDVLLLAWQQGATGYPIVDAAMRQLNETGWMHNRLRMISASFLVKDLL
IDWRAGERYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDPQGTFIR
KWLPELADVPDNALHQPHRWAEKQQRTLDYPLPIVDHKQARLETLAAFEAARRGEY
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcatctggtctggttacgtaacgatctgcgtataaccgacaataaagcgttg
cacgccgcctgttgcgatcccgctgcccgcgtgctggcggtgtttatcgctacccctggg
caatggcgacagcatgagatggcaccgcgtcaggcggcattcattcatgccaacctgctg
caggttcagcaggcgctggcggatcgcggtatcccgctggtctgccatcagtgcgatgat
ttttccgccgctgttgactggttggtggcgtattgcgcgcaagagcgggtggatgcgctg
ttttataaccgccagtacgagttcaatgaactaaagcgtgaccaacaggcgcaacggcgt
ttatccgggcaggtgatttgccaaagcttcgatgacagcctgctgttgccgccgggcagc
gtacaaaccggcggcggtgaaatgtacaaaatttatacgccgttccgtaaggcttttatc
caacggctgaccgaatccgacgtccgttctttgccggcgcccaaacttcgtgaaggcggc
gtgttgccggtgtcagctgtgccggcggcgttcgattacccgcaggctgaggtgggcgta
gattttcccgctggtgaagacgcggcgctgcaacggctgcgcgctttctgccgtgagcaa
gtgcaggattacctgcaacaacgcgactttcccgctattgccggcaccagcagcctgtcg
ccgtatctggcgattggcgtactgtcgccgcgccagtgttttaaccgcctgcgggctgaa
tgcccgcaggtgctggaaaacagcgacagcggcgcttttggctggctgaacgaattgatc
tggcgcgaattttatcggcatctgatggtggcctatcctgcgttatgcaggcaccgtccc
tttatcgagtggacggataaggtacgctggcaggataacgacgtactgttgctggcctgg
cagcaaggtgcgacaggttacccgatcgtcgatgccgccatgcgtcagttgaatgaaacc
ggctggatgcacaataggttacgcatgatcagcgccagctttttggtgaaagatctgctg
atcgactggcgagcaggcgaacgttatttcatgtcgcaactgttggacggcgatctggcg
gcgaataacggtggctggcagtgggcggcctcaaccggcaccgacgccgcgccgtatttc
cgcatctttaacccgaccacccagggcgaacgttttgatccgcaaggcactttcatccgt
aaatggttgcctgagctggcggatgtaccggacaatgctcttcatcaaccccatcgctgg
gcggaaaaacagcaacgcacgctggattatcctttgccgattgtcgatcacaagcaggcc
cggctggagacgctggcggcctttgaagcggccaggcggggggaatattaa
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