Serratia plymuthica AS9: SerAS9_1237
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Entry
SerAS9_1237 CDS
T01503
Name
(GenBank) succinate dehydrogenase or fumarate reductase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
srr
Serratia plymuthica AS9
Pathway
srr00020
Citrate cycle (TCA cycle)
srr00190
Oxidative phosphorylation
srr00650
Butanoate metabolism
srr00720
Other carbon fixation pathways
srr01100
Metabolic pathways
srr01110
Biosynthesis of secondary metabolites
srr01120
Microbial metabolism in diverse environments
srr01200
Carbon metabolism
Module
srr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
srr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
srr_M00149
Succinate dehydrogenase, prokaryotes
srr_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SerAS9_1237
00650 Butanoate metabolism
SerAS9_1237
09102 Energy metabolism
00190 Oxidative phosphorylation
SerAS9_1237
00720 Other carbon fixation pathways
SerAS9_1237
Enzymes [BR:
srr01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SerAS9_1237
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
BEX
RBD_DGKtheta
Motif
Other DBs
NCBI-ProteinID:
AEF44375
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Position
1352605..1354314
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AA seq
569 aa
AA seq
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MRAALQISQAGSTCALISKVFPTRSHTVSAQGGITVALGNNHEDNWEWHMYDTVKGSDYI
GDQDAIEYMCKTGPEAVLELEHMGLPFSRTDEGRIYQRPFGGQSLNFGGEQAARTAAAAD
RTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGTTAICIETGEVVYFKAKATV
LATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRG
EGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHVKLKLDHLG
KDVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVV
IPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGMHLQESLAEQGESRDASESDVDA
SLERLNRWNNTRSGEDPVEIRKALQACMQHNFSVFREGDAMAKGLEELKEIRERLKNARL
DDTSSEFNTQRIECLELDNLMETAFSTAVSANFRTESRGAHSRFDFPERDDANWLCHSLY
QPQSESMTRREVNMQPKLRPAFPPKVRSY
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcggcactgcagatttctcaagcggggtccacatgcgccctgatatccaaagta
tttccgacccgttcccataccgtgtctgcgcagggcggcattaccgtagccctgggtaat
aaccacgaagataactgggaatggcatatgtatgacacggtgaaaggctccgattatatc
ggtgaccaggacgccatcgaatatatgtgtaaaaccggcccggaagcggttctggagctg
gagcacatggggctgccgttctcccgtacggatgaaggccgcatctatcagcgcccgttc
ggcggccagtcgctgaactttggtggcgagcaggcggcacgcactgcggcggcggccgac
cgtaccggtcacgccctgttgcacaccctgtatcaacagaatctgaaaaaccataccacc
attttctccgagtggtatgcgctggatctggtgaaaaaccaggatggcgcggtggtgggc
accacggctatctgtatcgaaaccggtgaagtcgtgtacttcaaagccaaagctaccgtg
ctggcgaccggcggtgcaggccgtatttaccagtccaccaccaacgcacacatcaacacc
ggtgacggtgtcggcatggcgctgcgtgccggcgtgccggtgcaggacatggaaatgtgg
cagttccacccgaccggcatcgccggcgctggggtattggtgactgaaggttgtcgtggt
gaaggcggttacctgctgaacaaacacggcgagcgtttcatggagcgctacgcgccgaac
gccaaagatctggcgggccgtgatgtggtcgcccgttcgatcatgattgaaatccgtgaa
ggccgcggctgtgacggtccgtggggtccacacgtcaagctgaagctggatcacctgggt
aaagacgtactggaatcccgcctgccgggcattctggaactgtcgcgcactttcgcacac
gtcgatccggtgaaagagccgatcccggtgatcccgacctgccactacatgatgggcggc
attccgaccaaggtgaccggccaggcactgaccgtgaacgagaaaggcgaagatgtggtg
atcccgggcctgtttgccgtgggcgaaatcgcttgcgtatcggtacacggcgccaaccgt
ctgggcggcaactcgctgctggatctggtggtattcggtcgtgcagccggtatgcattta
caggaatctctggcggagcagggcgagagccgtgatgccagcgaatcggatgtggatgcg
tcgctggagcgactgaaccgctggaacaacacccgttcgggtgaggatccggtcgaaatt
cgcaaggcgctgcaagcctgtatgcagcacaacttctcggtattccgtgaaggtgatgcc
atggcgaaagggctggaagagttgaaagagatccgtgaacgtctgaagaacgcgcgcctg
gacgatacctccagcgaattcaacacccagcgcatcgaatgcctggagttggataacctg
atggagactgcgttttccaccgccgtgtcggccaacttccgtaccgagagccgtggagcg
cacagccgcttcgatttcccggaacgcgatgacgccaactggctgtgccattcgctgtat
cagccgcaatcggaaagcatgacgcgtcgtgaagtgaacatgcaaccgaagctgcgcccg
gcattcccaccgaaagtgcgttcctactga
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