Serratia plymuthica AS9: SerAS9_2365
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Entry
SerAS9_2365 CDS
T01503
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
srr
Serratia plymuthica AS9
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srr03000
]
SerAS9_2365
Transcription factors [BR:
srr03000
]
Prokaryotic type
Helix-turn-helix
Other families
SerAS9_2365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
AAA_5
HTH_50
PAS_8
MCM
HTH_30
Mg_chelatase
HTH_28
AAA
AAA_3
ATPase
HTH_29
AAA_2
HTH_23
AAA_16
HTH_17
HTH_7
Phage_CP76
HTH_38
PAS_7
HTH_22
Motif
Other DBs
NCBI-ProteinID:
AEF45491
LinkDB
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Position
complement(2537812..2539782)
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AA seq
656 aa
AA seq
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MHTAAGLMPIKDESDPIFSLPGGPEASEWDSLFWQGWQVFNEGGQPGWIRKSILQSWQRS
RENGIDPEEFVYHSPPAERLQMILAQNNELIKVAHSIMENLLAYNPDGHINLTDASGVTL
HYCGADLTPVGSILSEEVQGTNCTARCLREQRLVYVLSGENWKMGLRQRHRQCAAAPVRN
AEGVMIGVLTLTATPDNFNAHTLGTVQAAAEAVGQQLQLRRLLAEQQSIMETLNEGVIVC
DRHGRLKTVNRYARQIFDGLEPGNLSLDQLLRPQSGSLLTMPFCNDREMVFMPEGKPALS
CVISLMPAPDDGRVLSLRENQRIRAITRRVMGVSASYTFDMIYGHSSRIREAIAKARTSS
RSDSTVLLTGESGTGKELFAQAIHNGSARSNEPFVAVNCGALPRDLVQSELFGYVDGAFT
GSRRGGSAGKFELADGGTLLLDEIGEMPLDAQTSLLRVLQESEVLRIGATHPVKVNVRIV
AATNCDLAQAVENGAFRRDLYYRLNVISLSVPPLRERREDIVGLVNGFVHKLCTRMKKIP
PQVSPQAMACLSAWRWPGNVRELENLVERMVNLCEGLQIDVGDLPEEITRDRTEPDATPS
ARLEDNERTHIMQVIESSGGNLRQAAQRLGLSRTTLYNKINKWRIDLTLLRPERPA
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgcacactgccgccggactgatgccgatcaaagacgagagcgacccgattttcagcctc
ccgggaggcccggaggccagtgaatgggatagcctgttttggcaaggctggcaggttttt
aatgaaggcgggcaacccggctggatccgcaagtcgatcctgcaatcctggcaacgttcg
cgtgaaaacggcatcgaccccgaagagtttgtctatcactcgccgccggcagagcggttg
cagatgattctggcgcaaaacaacgagctgattaaggtggcgcacagcatcatggaaaac
ctgctggcctacaaccctgacggccacatcaacctgaccgatgcctccggcgtcaccctt
cactactgcggagcggatttgacaccggtcggcagcatcctcagcgaggaggttcagggc
accaactgcaccgcgcgctgcctgcgggaacagcgcctggtgtatgtgttaagcggtgaa
aactggaaaatgggcctgcgtcagcgccatcgccaatgtgcggcagcaccggtgcgtaac
gctgaaggcgtgatgatcggcgtgctgacgctcaccgccacgccggataacttcaacgcc
cacaccttgggcaccgtgcaggcggctgcggaagccgtcggccaacagttgcagttgcgt
cggctgctggcggaacaacagtccattatggaaacgctgaatgaaggcgttattgtctgc
gatcgccacggcaggctgaaaaccgtcaaccgctatgcgcgccagatttttgacggcctg
gagcctggcaacctgtccctcgaccagttgctgcgcccgcagtccggctcgctgctgacc
atgccgttttgtaacgatcgtgaaatggtctttatgcccgaaggcaaaccggccctctcc
tgcgtgatttcgttgatgcccgcgccggatgacggccgggtgctctccctgcgggagaac
cagcgtattcgcgctatcacccgccgagtgatgggcgtcagcgccagctatacctttgac
atgatatacggccactccagccgcatacgggaagccatcgccaaggcgcgtaccagcagc
cgcagcgacagcaccgttctgctgaccggcgagagcggaaccggcaaagagctgtttgct
caggcgatccacaacggcagcgcacgcagcaatgaacccttcgttgccgttaactgcggc
gccttgccgcgcgatctggtgcagagcgagcttttcggttacgtggatggcgcctttacc
ggttcgcgccgtggcggttccgccgggaaatttgagctggcggatggcggtactttgctg
ctcgatgaaatcggcgaaatgccgctggatgcgcaaaccagtctgctgcgcgtactacag
gagagtgaagtgctgcggatcggcgccacccacccggtgaaggtcaacgtgcgcatcgtg
gcggccaccaattgcgatctggcgcaggcggtggagaatggcgctttccggcgcgatctg
tattaccgcctgaacgtcatctccctctcggttccgccgctgcgcgaacgacgggaagat
atcgtcgggctggttaacggctttgtgcacaaactctgtacgcgcatgaaaaaaatcccg
ccgcaggtatcaccgcaagcgatggcctgccttagcgcctggcgctggccgggcaacgtg
cgcgaactggaaaacctggtggaacgaatggtgaacctgtgcgaagggctacagatcgac
gtgggcgacctgccggaggaaatcactcgtgatcgtactgaacctgacgcaacaccgtcc
gcgaggctggaagataacgaacgtacccatatcatgcaggtgattgaatccagtggcggc
aatctgcggcaggctgcgcagcggctcggactatcgcgcaccacgctgtacaataaaatc
aataaatggcggatcgatttgaccctgttgcgccctgaacggccggcttga
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