Serratia plymuthica AS9: SerAS9_3020
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Entry
SerAS9_3020 CDS
T01503
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
srr
Serratia plymuthica AS9
Pathway
srr02020
Two-component system
srr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SerAS9_3020
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SerAS9_3020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srr03021
]
SerAS9_3020
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
srr02035
]
SerAS9_3020
Transcription machinery [BR:
srr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SerAS9_3020
Bacterial motility proteins [BR:
srr02035
]
Flagellar system
Flagellar assembly proteins
Stator
SerAS9_3020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0147
UPF0122
DUF4351
Motif
Other DBs
NCBI-ProteinID:
AEF46139
LinkDB
All DBs
Position
complement(3220955..3221677)
Genome browser
AA seq
240 aa
AA seq
DB search
MSDLYTAEGVMDKNSLWLRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYD
ALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRHAREVAQVMRQLEQRLGRPASEVEV
AQTLNIPLDEYRQILLDTNNSQLFSYDEWREEHGESAEPLLEGHEEANPLHHLLEGNLRQ
RVINAIDALPEREKMVLTLYYQEELNLKEIGAVLDVGESRVSQLHSQAIKRLRARLAAEN
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatctgtataccgccgaaggcgtgatggacaaaaattctctttggctgcgctat
gttccgttagtgcgccacgaggcgttgcgcctgcaggtcaggttgcccgccagcgtggag
ctcgacgatctgctgcaggccgggggaatcgggttgttgaacgccgttgagcgttatgac
gccctgcagggaaccgcctttaccacctatgcggtgcagcgcattcgcggcgcaatgctc
gatgagctgcgcagccgcgactgggtgccgcgcagcgtgcgtcggcatgcacgtgaagtg
gcacaggtgatgcggcaactggaacagcggctcggccgcccggccagtgaagtggaagtc
gcgcagacgctgaatatcccgctggatgagtaccgtcaaatactgttggacaccaataac
agccagcttttctcctacgacgaatggcgtgaagagcatggcgaaagcgcagagccgctg
ctggaagggcacgaagaggccaacccgctgcatcatctgctggagggcaacctccgccag
cgggtgatcaacgctatcgacgcgttgccggagcgcgagaaaatggtgctgacgctgtat
taccaggaagagttgaacctgaaagagatcggtgccgtgctggacgtgggggaatcgcgc
gtcagccaactgcacagtcaggcgatcaagcggctgcgcgcccgcctggcggccgaaaat
tga
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integrated database retrieval system
