Serratia plymuthica AS9: SerAS9_3465
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Entry
SerAS9_3465 CDS
T01503
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
srr
Serratia plymuthica AS9
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srr03032
]
SerAS9_3465
03400 DNA repair and recombination proteins [BR:
srr03400
]
SerAS9_3465
Enzymes [BR:
srr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SerAS9_3465
DNA replication proteins [BR:
srr03032
]
Prokaryotic type
DNA Topoisomerases
SerAS9_3465
DNA repair and recombination proteins [BR:
srr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SerAS9_3465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
AEF46574
LinkDB
All DBs
Position
complement(3686299..3688950)
Genome browser
AA seq
883 aa
AA seq
DB search
MSDLAREITPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMSKIAHELLADLEKETVDFVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLSEVINGCLAYIDDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI
YLRARAEVETDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG
MRIVVEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALHQGQPKLLNLKDILQAFVRHRRE
VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAGLVAQAWDLGNV
GAMLERAGDDAARPEWLEPEFGIRDGKYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLTFIAELIFILENPDRLMEVIREELVAVKELYNDGRRTEITANTSDINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEANERITAILPVREYEEGRHVFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSANGKVVRFPETQVRSMGRTATG
VRGINLGEGDGVISLIVPRGEGDILTVTQNGYGKRTAVTEYPTKSRATQGVISIKVSERN
GQVVGAVQVETTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAEDENVVGLQRVA
EPVEDEELDSLEPGAEEAEEDAAPLDDADDDSEAADDAEDDNA
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaatcacaccggtaaacatcgaagacgagttaaaaaactcg
tatctggattacgcgatgtccgtcattgtcggacgtgcgctgccagatgttcgtgatgga
ctgaagccggtgcaccgccgcgttctgttcgcgatgagtgtattgggtaacgactggaat
aaaccatacaagaaatcggcccgtgtcgtcggggacgtgatcggtaaataccacccacac
ggtgacagtgcggtatacgacaccatcgtgcgtatggctcagccgttttcactgcgctat
atgctggtggacggtcagggtaacttcggttccgtcgatggcgactccgccgcggcgatg
cgttataccgaagtacgcatgtccaaaattgctcacgaattgctggcggatctggaaaag
gaaaccgtcgacttcgtgcctaactatgatggcaccgagcagatcccggccgtcatgcca
accaagatcccgaacctgctggttaacggctcgtcgggcatcgcagtggggatggccacc
aacattccgccgcataacctgtctgaggttatcaacggctgcctggcttacatcgatgat
gaaaacatcagcatcgaaggcctgatggaacacatcccggggccggacttcccgacggcg
gcgatcatcaacggtcgccgtggcatcgaagaggcctaccgtaccgggcgcggtaaaatc
tacctgcgcgctcgtgccgaagtagaaaccgacgccaaaaccggccgcgaaaccattatt
gttcacgaaatcccgtaccaggtgaacaaagcgcgtctgatcgagaagatcgccgagctg
gtaaaagaaaaacgcgtggaaggtatcagcgcgctgcgtgacgagtccgacaaagacggt
atgcgcatcgtggttgaaatcaagcgcgatgcggtcggcgaagtggtactgaacaatctg
tattcgctgactcagctgcaggtcaccttcggcatcaacatggtggcattgcatcagggt
cagccaaaactgctgaacctgaaagacattctgcaggcgtttgtccgccatcgccgtgaa
gtggtgacccgccgtaccatcttcgaactgcgtaaagcccgcgaccgcgcccatattctg
gaagcgttggccatcgcgctggcaaacatcgatccgatcattgaactgatccgtcgtgcg
ccgacccctgcggaagctaaagccgggttggttgctcaagcctgggatctgggcaatgta
ggcgcgatgctggaacgtgccggtgacgacgcggcccgccctgagtggctggagccggag
ttcggcatccgtgacggcaaatactacctgaccgagcaacaggctcaggcgattctggat
ctgcgtctgcagaaactgaccggcctggagcatgaaaagctgctggacgagtataaagag
ctgctgactttcatcgctgagctgatctttattctggaaaaccccgatcgtctgatggaa
gtgatccgcgaagaactggtggcggtcaaagagctgtacaacgacggccgccgcaccgag
atcaccgccaacacgtcagatatcaatatcgaagacctgatcaaccaggaagacgtggtc
gttacgctgtcgcaccagggctatgtgaaatatcagccgctgagcgactatgaagcgcaa
cgccgcggcggtaaaggcaagtcagccgcacgtattaaagaagaagactttatcgatcgt
ctgctggtggccaacacccacgatacgatcctgtgcttctccagccgtggccgcctgtac
tggatgaaggtgtatcaactgcctgaagccagccgtggcgcacgcggtcgcccaatcgtc
aacctgctgccgctggaagccaatgagcgtatcaccgccattctgccggtgcgcgagtat
gaagaagggcgtcacgtgtttatggcaaccgccagcggcaccgtgaagaaaaccgctttg
accgagttcagccgtccgcgcagcgccggcatcatcgccgtcaacctcaatgagggtgat
gagctgattggtgttgacctgaccgatggcagcaacgaagtcatgctgttctccgccaac
ggtaaagtggtgcgcttccctgaaacgcaggtgcgttcgatgggccgtaccgccaccggc
gttcgcggtatcaacctgggtgaaggcgatggcgttatttccctgatcgtcccgcgcggt
gaaggcgacatcctgaccgtaacccagaatggctacggtaaacgtaccgcagtcaccgaa
taccctaccaagtcgcgcgctacccaaggggttatctccatcaaggtgagcgagcgtaat
ggtcaggttgtcggcgcggtgcaggtggaaactaccgatcagatcatgatgatcaccgat
gccggtacgctggtgcgtactcgcgtgtcggaagtcagcgtggtcggccgtaatacccag
ggtgttacgctgatccgtactgcggaagacgagaacgtcgtcggtctgcagcgcgttgcc
gagccggtggaagacgaagagttggacagcctcgaaccgggcgcggaagaagcggaagaa
gacgctgcaccgctggacgacgctgacgatgattctgaagccgcagatgatgcggaagat
gacaacgcctaa
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