Serratia plymuthica AS9: SerAS9_3801
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Entry
SerAS9_3801 CDS
T01503
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
srr
Serratia plymuthica AS9
Pathway
srr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SerAS9_3801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srr03400
]
SerAS9_3801
Enzymes [BR:
srr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SerAS9_3801
DNA repair and recombination proteins [BR:
srr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SerAS9_3801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AEF46903
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All DBs
Position
4063468..4064859
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AA seq
463 aa
AA seq
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MSLPVSPSIFTVSRLNQTVRQLLEMEMGQIWLSAEISNFSQPASGHWYFTLKDDRAQVRC
AMFRNSNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFDQLKQR
LSAEGLFDQQFKQPLPSPAKRVGVITSASGAALHDVLQVLQRRDPSLPIVIYPTSVQGAE
APLQIVRAIETANRRDECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHET
DVTIADFVADLRAPTPSAAAELVSRNQLELLRQLQSQQQRMEMAMDYYLAQRQQQFTRIN
HRLQQQHPHLRLARQQTLLFKLQRRLEDGMQNQLRLSSRRSDRVQQRLAQVQPQARIHRY
QQRVQQQEYRLQQALERQLNAYRQRFGVACSQLEAVSPLATLARGYSVTQTPRGEVLKTT
KQAQVGELLKTRLQDGWVESEVKTITVAKKPRKKRATESTRHT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctacctgtctcgccgtctatttttaccgtaagccgcctgaatcagacggttcga
cagctgctggaaatggaaatgggccagatttggctctccgccgagatctccaacttctct
caaccggcttccggccactggtatttcacgctgaaagacgaccgcgcgcaggtgcgttgt
gcgatgttccgcaacagcaaccgccgcaccaccttccgcccgcaaaacggccagcaagtg
ttggttcgcgccagcatcacgctgtacgagccgcgcggcgactatcagctgattgccgaa
agcatgcaacccgccggcgacggcctgctgcaacagcaattcgatcaactgaaacagcgc
ctgagcgccgaaggcctgttcgaccaacagttcaaacaaccgctgcccagcccggccaaa
cgcgtcggggtgatcacctccgccagcggcgcagcgctgcacgatgtgctgcaagtgctg
caacggcgcgatccttctctgcccatcgttatctacccgacctcggtgcagggcgcagaa
gcgccattgcagatcgtgcgcgccatcgaaacggccaaccgccgcgacgaatgcgacgtg
ctgatcgtcggccgtggcggcggctcgctggaagacctgtggagttttaacgacgaacgc
gtagcgcgggcgatattcgccagccgcattccgatcgtcagcgccgtcggccatgaaacc
gacgtcaccattgccgactttgtcgccgatctgcgtgcgccaaccccttccgccgccgcc
gaactggtcagccgcaatcagttggagctgttgcgtcagttgcaatcccagcagcagcgg
atggaaatggcgatggattactatctggcccagcgtcaacagcagttcacccgcatcaac
caccgtttgcagcaacagcatccgcacctgcgcctggcgcgccagcagacgctgttgttc
aagctgcaacgccggttggaagacggcatgcaaaaccagctgcgcctgtcttcacgccgc
agcgatcgggtgcaacaacgtttggcgcaggtacagccgcaggcgcgcattcaccgttat
cagcaacgcgtgcagcaacaggaataccgtttgcagcaggcgctggagcgccaactcaat
gcttaccgccagcgtttcggcgtggcctgcagccagctcgaagcggtcagcccgttggcg
acgctggcgcgcggctacagcgtgacgcaaaccccgcgcggcgaagtgctgaaaaccacc
aaacaggcgcaggttggcgaactgctgaaaacccgcctgcaggatggctgggtggaaagc
gaagtgaaaactatcaccgtcgccaagaagccgcgaaaaaaacgcgcgactgaatctacc
cgtcatacttga
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