Serratia plymuthica AS9: SerAS9_3822
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Entry
SerAS9_3822 CDS
T01503
Name
(GenBank) transcriptional regulator, RpiR family
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
srr
Serratia plymuthica AS9
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srr03000
]
SerAS9_3822
Transcription factors [BR:
srr03000
]
Prokaryotic type
Helix-turn-helix
Other families
SerAS9_3822
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
MarR_2
SIS_2
HTH_36
HTH_IclR
MarR
HTH_Tnp_ISL3
HTH_AsnC-type
HTH_24
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AEF46924
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Position
4093481..4094269
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AA seq
262 aa
AA seq
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MDNRLASLLQRGEDLTRAEYRVLAFIADHALQVGKLTVRELARETFVSTATVMRLCHKLG
FSGYSELLFTIKQLLSDNPTLVLTSPSPGNLPAAFQQFIANYQRTFAYVSAEKIAAFSDL
LQQEESFYLYGTGFSHLFAEYLEKKLQILGKSAFVSGGGDSRGIFLNNAPKYRVLIVISR
SGKTEQVLDKTRIARNIGMKVVAFTRASINPLAPLADIHFPLYDDASDAAVDAGEITSFE
SNLVMLMDLLLLSATGGLRAAR
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
ttggataaccgtctggcttctttgctgcaacgcggcgaggatctcacccgcgccgaatac
cgggtgctggcctttatcgccgaccatgccctgcaggtaggcaaactcaccgtacgcgag
ctggcgcgcgaaacctttgtctccaccgctaccgtgatgcgtttatgtcataaactgggg
ttcagcggctacagcgagctgctgttcaccatcaaacagctactgagcgataatccaacg
ctggtgctcacctccccttcgcccggcaatctgccggcggcgtttcaacagtttatcgcc
aactaccagcgaacctttgcctacgtcagcgcagagaaaatcgccgcattcagcgacctg
ttgcagcaggaagaaagtttttacctgtacggcaccggcttttcgcatctgtttgccgaa
tatctggaaaagaagctgcagatcctcggtaaaagcgcctttgtctccggcggcggcgac
agccgcggtattttcctcaacaacgcgcctaaataccgggtgctgatcgtgatttcacgc
agcgggaagaccgagcaggtactggacaagacgcgcatcgcgcgcaacataggtatgaaa
gtggtggcttttacccgagcctccatcaacccgttagcgccgttggcggatattcacttt
ccgttgtacgacgacgccagtgacgcggcggtcgatgccggtgagataacctcgttcgaa
tcgaacctggtgatgctgatggatttattgctgttgagcgctaccggcgggctgcgcgcc
gcacggtag
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