Serratia plymuthica AS9: SerAS9_3843
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Entry
SerAS9_3843 CDS
T01503
Name
(GenBank) putative two component, sigma54 specific, transcriptional regulator
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
srr
Serratia plymuthica AS9
Pathway
srr02020
Two-component system
srr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SerAS9_3843
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SerAS9_3843
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
srr02022
]
SerAS9_3843
Two-component system [BR:
srr02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
SerAS9_3843
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Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
AAA_5
HTH_8
AAA_2
AAA_16
AAA
PDE8A_N
DUF7317
UPF0175
nSTAND6
AAA_7
nSTAND3
MCM
Motif
Other DBs
NCBI-ProteinID:
AEF46945
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Position
complement(4113601..4114938)
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AA seq
445 aa
AA seq
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MTARKPANLLLVDDDPSLLKLLGMRLTSEGFHVTTAESGQEALRLLGREQIDLVISDLRM
DEMDGMALFAEIQKHQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDRDALYKAIDE
ALSLSLPAGDDSWREDIVTRSPIMLRLLEQAKMVAQSDVSVLINGHSGTGKEVLAQAIHG
ASPRGKKAFIAINCGALPEQLLESELFGHAKGAFTGAVSSREGLFQAAAGGTLFLDEIGD
MPLSLQVKLLRVLQERKVRPLGSNRDLDIDVRIISATHRDLQKAMAKNEFREDLYYRLNV
VNLKIPALNERAEDIPLLANHLLRESAKRHKPFVRSFSSDAMKRLVTATWPGNVRQLVNV
IEQCVALTSAPVISEALVEQALEGENTALPTFVEARNQFELHYLRKLLQITKGNVTQAAR
MAGRNRTEFYKLLSRHELDANDFKE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgacagcacgcaaaccggccaatctgttattggttgacgacgatcccagcttgctcaag
ctgttgggtatgcgcctgaccagcgaaggttttcatgtcaccaccgccgaaagcggccag
gaagcgctgcgcctgttggggcgtgaacagattgatctggtaatcagcgatctgcggatg
gacgaaatggacggcatggcgctgtttgccgaaattcaaaagcaccagcctggcatgccg
gtcatcatcctcaccgcccatggttcgatcccggatgcggtagccgccactcagcagggc
gtgttcagcttcctcaccaaaccggtggatcgcgatgcgctgtacaaggccatagatgaa
gcgctgtcgctttcgctgccggccggtgacgacagctggcgcgaagatatcgtcacccgc
agcccgattatgctgcgcctgctggagcaggcgaaaatggtggcgcagtccgacgtcagc
gtgctgatcaatggccacagcggcaccggtaaagaagtgttggcccaggcgatccacggt
gccagcccgcgcggcaaaaaggcgtttatcgccattaactgcggcgccttgccggaacaa
ctgctggagtctgagctgttcggtcacgccaaaggggcgtttaccggtgcggtcagcagc
cgtgaagggctgttccaggcggcggcgggcggcacgctgttcctcgatgagatcggcgat
atgccgctgtcgttgcaggttaaactgctgcgcgtgctgcaggagcgcaaggtgcgcccg
ctgggcagcaaccgcgatctggacatcgacgtgcgcattatttccgccacccaccgtgac
ctgcaaaaggcgatggcgaaaaacgagttccgcgaagatctctactaccgcctgaacgtg
gtgaacctgaagatccctgcgctgaatgaacgggctgaagatattccgctgctggccaac
catctgctgcgtgaatccgccaagcgccacaagccgtttgtccgcagcttctcttccgac
gccatgaagcgcctggtgaccgccacctggccgggcaacgtgcgccaactggtgaacgtg
atcgagcagtgcgtggcgctgacgtctgcgccggtgatcagcgaagcgctggtggagcag
gcgctggaaggggaaaataccgcgttgccgaccttcgtcgaggcgcgcaatcagtttgaa
ttgcactatctgcgcaagctgttgcagatcaccaagggtaacgtaacccaggccgcacgc
atggcggggcgcaaccgtaccgagttttataaattgctgtcgcgccacgagctggacgcc
aacgattttaaagaatga
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