KEGG   Serratia plymuthica AS9: SerAS9_3860
Entry
SerAS9_3860       CDS       T01503                                 
Name
(GenBank) Ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
srr  Serratia plymuthica AS9
Pathway
srr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:srr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SerAS9_3860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:srr03019]
    SerAS9_3860
   03009 Ribosome biogenesis [BR:srr03009]
    SerAS9_3860
   03036 Chromosome and associated proteins [BR:srr03036]
    SerAS9_3860
Enzymes [BR:srr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     SerAS9_3860
Messenger RNA biogenesis [BR:srr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SerAS9_3860
Ribosome biogenesis [BR:srr03009]
 Eukaryotic type
  90S particles
   RNase
    SerAS9_3860
 Prokaryotic type
  rRNA processing factors
   SerAS9_3860
Chromosome and associated proteins [BR:srr03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     SerAS9_3860
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2 RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: AEF46961
LinkDB
Position
complement(4133052..4133732)
AA seq 226 aa
MNPIVINRLQRKLGYTFQQQELLLQALTHRSASSKHNERLEFLGDSILSFVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIQNVERLILDWYRSRLDEISPGDKQKDPKTRLQEFLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE
NT seq 681 nt   +upstreamnt  +downstreamnt
atgaaccccatcgtaataaacaggctgcagcggaagctgggctacacttttcaacagcag
gagctcttactgcaagcgttgactcaccgtagcgccagcagtaaacacaatgaacgtctt
gagtttctgggtgactctattcttagttttgtcatcgccaatgcgctctaccatcgtttt
cctcgcgtagacgagggcgatatgagccgcatgcgtgccacgctggtgcgcggtaatacg
ctggcagagatggcgcgcgagttcgacctgggcgaatgtctgcgtctcgggccgggtgag
ttgaaaagtggtggattccgccgcgaatcaatcctggcggatacggtggaggcattaatt
ggcggcgtgttcctggatagcgatatccaaaacgtcgaacgactgattttggactggtat
cgcagccggttggacgaaatcagccccggtgataagcagaaagacccgaaaacccgcttg
caggagtttttacaaggtcgtcatctgccgttgccttcttatctggtggtgcaggttcgc
ggtgaggcgcacgatcaggagtttactatccactgccaggtgagtggtttgagcgaacct
gtagtgggtaccggctcaagccgccgtaaagccgaacaggcagcagcggaacaagcgttg
aaaaagctggagcttgaatga

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