Serratia plymuthica AS9: SerAS9_3874
Help
Entry
SerAS9_3874 CDS
T01503
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
srr
Serratia plymuthica AS9
Pathway
srr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SerAS9_3874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srr03400
]
SerAS9_3874
Enzymes [BR:
srr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SerAS9_3874
DNA repair and recombination proteins [BR:
srr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SerAS9_3874
Prokaryotic type
SerAS9_3874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Tox-HDC
Motif
Other DBs
NCBI-ProteinID:
AEF46975
LinkDB
All DBs
Position
4147534..4148217
Genome browser
AA seq
227 aa
AA seq
DB search
MSTSLTWHDVIGKEKEQPYFHETLAFVAAERQAGKTIYPPQKDVFNAFRYTELADVKVVI
LGQDPYHGPNQAHGLSFSVLPGVPAPPSLVNMYKELATDIPGFERPSHGCLQSWAEQGVL
LLNTVLTVERGQAHSHAKLGWETFTDRVIAALNDNREGVVFLLWGSHAQKKGNIIDSKRH
HVLKAPHPSPLSAHRGFLGCRHFSQANQLLEQQGLKPIDWLPQLPQA
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtctacctccctcacctggcatgacgtcatcggcaaggaaaaagagcaaccctatttt
catgaaacgcttgcctttgttgccgctgaacgccaggccggtaagaccatttatccacca
caaaaagacgtgttcaacgccttccgctataccgaactggcggacgtgaaagtggtgatc
ctcggccaggatccttatcacggcccgaatcaggcccacggcctttctttctcggtgctt
cccggcgtgccggcgcccccttcgctggtcaacatgtataaagaattggcgacggatatc
ccgggatttgagcggccaagccacggctgcctgcaaagctgggcggaacagggcgtgctg
ctgctgaacacggtattgaccgttgaacgcggccaggcgcattcccacgcaaaactgggt
tgggaaacctttacggatagagtgatcgccgcactgaatgacaaccgcgaaggcgtggtg
tttctgctgtggggctcgcatgcccaaaagaaaggcaacattatcgacagcaagcgccac
cacgtgctgaaagcgccgcatccttcgccgctctcggcccaccgcggcttcctcggttgt
cgccatttctcgcaggccaatcaactgctggaacaacaggggctgaaacctatcgactgg
ctgccgcaactgccgcaggcataa
DBGET
integrated database retrieval system
