Serratia plymuthica AS9: SerAS9_4305
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Entry
SerAS9_4305 CDS
T01503
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis Family
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
srr
Serratia plymuthica AS9
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srr03000
]
SerAS9_4305
Transcription factors [BR:
srr03000
]
Prokaryotic type
Helix-turn-helix
Other families
SerAS9_4305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
GAF
GAF_3
AAA_5
Mg_chelatase
AAA_16
AAA
HTH_8
MCM
AAA_2
AAA_7
AAA_3
HTH_50
Motif
Other DBs
NCBI-ProteinID:
AEF47399
LinkDB
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Position
complement(4637047..4639101)
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AA seq
684 aa
AA seq
DB search
MSNASIEKQELLEIARLLFSQRGYGDVLTQLQQIVRRWRLADDVTLLLLHPSSARVGFHG
HDSHGQPLNYQDETLLANGPIALLRENAQPLRLCGADLRQRYPQLAMLALYPPLSHYCLM
PLRTGGQLLGGCELLRNDGNAFEDAALDALTPLMELTALAVEQVQLRETAERQQSQLRHE
RDDFRVLVDVTNAVLSKLDLDDLIGEISSEIHRFFKTDAISIVLPGDRDDRVTIYATHYL
QDNVAKRQQYSVPLAGTLSEKVMQSGEMLLLNLKHSDPLAEYERQLFDLWHEQIQTLCVL
PLIFGQKTLGVLKLAQCQPDNFNAANLRVLQQIAERIAIAVDNALAYQEISRLKESLVHE
NLYLTEQINDNNPDFSEIVGRSAVMSRVLQQVEMVAKSDCSVLILGETGTGKELIARAIH
NLSERRDQRMVKMNCAVMPAGLLESDLFGHEKGAFTGASTQRMGRFELADKGTLFLDEVG
EIPVESQPKLLRVLQEREFERVGGNKLLSVDVRLIAATNRDLQQMVADREFRSDLYYRLN
VFPILIPPLRERPEDIPQLVKFLTYKIARRMKRTIDSIPAETLRMLSQMPWPGNVRELEN
VIERAILLTRGTVLNLQLPELQYAQPSIAPIAVPPPAIAGEDEYQRIVRVLKETNGVVGG
PRGAAQRLGLKRTTLLSRMKKMGM
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatgcaagcatagaaaaacaggaactgttggaaattgcccgcttgttgttcagc
cagcgcggctatggcgatgtgctgacccagctgcaacagatcgttcggcgctggcggctg
gcggacgatgtgacgttgctgttgctgcacccgagcagcgcgcgagtcggcttccacggt
cacgacagccacggacagccgttgaactatcaggatgaaacgctgttggccaatgggccg
atcgcgctattacgcgagaatgcgcagccgctgcgcctgtgcggggccgatctgcgccag
cgttacccgcagttggcgatgttggcgctgtatccgccgctcagccattattgcctgatg
ccgctgcgcactggcgggcagttgcttggcggttgcgaactgttgcgtaacgacggcaac
gcgttcgaggatgcggcgcttgacgcattgacccccttgatggagctgacggcgctggcg
gtagagcaggtacaactgcgcgaaaccgccgagcgccagcagagccagttacgccatgag
cgcgatgatttccgcgtgctggtggatgtcaccaatgcggtgctgtccaagctggatctg
gacgatctgattggcgagatctccagcgagatccaccgcttcttcaaaaccgatgccatc
agcattgtgctgccgggcgatcgcgacgatcgcgtgacgatctacgccacccattatctg
caagataacgtggctaaacgtcagcaatacagcgtacccctggccggcacgctgtcggaa
aaggtgatgcagagcggcgaaatgctgctgctgaatctgaaacactcggatccgctggcc
gagtatgaacggcagctgtttgatctgtggcatgagcaaattcagacgctgtgcgtgctg
ccgctgattttcggccagaaaaccctcggtgtgctgaagctggcgcaatgccagccggat
aacttcaatgccgccaacttgcgggtgttgcagcagatcgccgagcgtatcgccattgcg
gtcgataacgcgttggcctatcaggaaatcagccgcttgaaagagagtttggtgcatgaa
aatctgtatctgaccgaacagattaatgacaacaatccggatttcagtgagatcgttggc
cgcagcgcggtgatgtccagggtgctgcaacaggtggaaatggtagcgaaaagcgactgt
tcggtattgatcctcggcgaaaccggcaccggaaaagagttgattgcccgcgccattcac
aatttgagcgagcgccgcgatcagcgaatggtgaagatgaactgcgcggtgatgcctgcc
gggctgttggaaagcgatctgttcggccatgaaaagggcgcatttaccggcgccagcacc
cagcgtatgggccgtttcgagctggcggacaaaggcacgctgtttttggacgaggtaggg
gaaatcccggtcgagtcgcagcctaaattgctgcgcgtgcttcaggagcgcgagtttgag
cgggttggcggcaacaagctgctttccgtcgatgtgcgtttgatcgccgccaccaaccgc
gatctgcagcaaatggtcgccgaccgcgagttccgcagcgacctctattaccgactcaat
gtcttcccgatactcattccgccgctgcgcgagcgaccggaggacatcccgcaactggtg
aaatttcttacctacaagattgcacggcgcatgaaacgcaccatcgacagcattccggcc
gaaacgctgcgcatgctgagccaaatgccgtggccgggcaacgtgcgcgaactggaaaac
gtcattgagcgggcaatattgctgacgcggggcacggtgcttaatctgcaactgccggag
ctgcaatatgcgcagccttccatcgcgccaatcgcagtgccgccgccggcaatagcgggt
gaagatgaatatcaacggattgtgcgggtactgaaagaaaccaacggcgtggtcggtggg
ccgcgtggcgctgcgcaacggctggggctgaaacgtaccactttgctttcacggatgaag
aaaatgggcatgtga
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