Serratia plymuthica AS9: SerAS9_4409
Help
Entry
SerAS9_4409 CDS
T01503
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
srr
Serratia plymuthica AS9
Pathway
srr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SerAS9_4409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srr03400
]
SerAS9_4409
Enzymes [BR:
srr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
SerAS9_4409
DNA repair and recombination proteins [BR:
srr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SerAS9_4409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEF47503
LinkDB
All DBs
Position
complement(4761715..4762203)
Genome browser
AA seq
162 aa
AA seq
DB search
MNLLAPNLRVVFCGINPGLSSAHQGYPFANGSNRFWKVLHQAGFTQRQLAPEQWQQLQDT
GCGITALVARPTVAASEVTREELRSGGEALKDKILQFQPRALAVLGKQAFSSAFGVKNAP
WGRQEMTIGKTEVWVLPNPSGLNRATLEQLTESYRELFLALE
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttggcgccaaacttgcgggtggtgttttgcggcatcaatcccggcctttcc
tccgcccatcagggctatccctttgccaatggcagcaaccgtttctggaaggtgctgcat
caggccggtttcacccagcgccaactggcgccggagcagtggcagcagttgcaggatacc
ggctgcggcatcaccgctttggtggcgcgcccgacggtcgcggccagcgaagtgacgcgt
gaagagttgcgcagcggcggtgaggcgttaaaagacaaaattctgcaattccagccgcgt
gcattggcggttctgggtaagcaggcgttcagcagcgccttcggggtgaaaaatgcgccc
tgggggcggcaggagatgacgatcggcaaaaccgaggtgtgggtattacctaatcccagc
gggttgaaccgtgccacgctggagcagcttacggagagctaccgcgagctgttcctggcg
ctggagtga
DBGET
integrated database retrieval system
