Serratia plymuthica AS9: SerAS9_4500
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Entry
SerAS9_4500 CDS
T01503
Name
(GenBank) transcriptional regulator, LysR family
KO
K21698
LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
Organism
srr
Serratia plymuthica AS9
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srr03000
]
SerAS9_4500
Transcription factors [BR:
srr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SerAS9_4500
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AEF47594
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Position
4852246..4853157
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AA seq
303 aa
AA seq
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MERLKRMSVFAKVVECGSFTAAARQLDMSVSSISQTVSKLENELQVKLLNRSTRRIGLTE
AGKIYYQGCRRMLQEVSEVHEQLYAFNNTPTGTLRIGSSSTMAQNVLATMTADMLKEYPG
LTVNLVTGIPAPDLIADGLDVVIRTGALQDSSLFSKRLGSMPMVICAAKNYLSQHGTPQK
PSDMVNFSWLEYSVRPDSEFELIAPEGITTRISPQGRFVTNDSQTMIRWLKAGAGIAYAP
LMWVIEEIKRGEIEILFKSYHSDPRPVYALYTEKDKLPLKVQVCIDYLTEYFKRVAEVYQ
GYR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggaaagactaaaacggatgtcggtgttcgcaaaagtcgttgaatgcgggtcgtttacg
gcggctgcgcgccagcttgatatgagcgtttcgtctatcagccagaccgtctccaaactg
gagaatgagctgcaggtcaagctgctcaaccgcagcacgcgccgcattggcctgacggaa
gccgggaaaatttactatcagggctgccgccgcatgctgcaggaagtgagcgaggtgcac
gagcagctgtacgcgtttaacaatacgccgaccggcacgctgcgtatcggcagttcgtcc
accatggcgcaaaacgtgctggcgaccatgaccgccgatatgctgaaggaatatcccggc
ctgacggtgaacctggtgaccggtattccggcgccggatctgattgccgatgggctggat
gtggtgatccgcaccggcgcgctgcaagattccagcctgttctccaaacgcctcggttca
atgccgatggtgatatgcgccgcgaaaaattacctcagccagcacggcacgccgcagaag
cccagcgacatggtcaacttttcctggctggaatacagcgtgcggccggacagcgaattc
gaactgatagcccccgaaggcatcaccacacgcatctcgccgcaagggcgctttgtcacc
aacgattcgcaaaccatgatccgctggctgaaagccggggcaggcatcgcctatgcaccg
ctgatgtgggtgatcgaagagatcaaacgcggtgagatcgagatcctgttcaaaagctat
cactcggatcctcgcccggtatacgccctgtacaccgagaaagacaagctgccgcttaag
gtgcaggtgtgcatcgactacctgacggagtacttcaagcgcgtggcggaagtctatcag
ggctaccgctga
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