Serratia plymuthica AS9: SerAS9_4511
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Entry
SerAS9_4511 CDS
T01503
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
srr
Serratia plymuthica AS9
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srr03019
]
SerAS9_4511
03009 Ribosome biogenesis [BR:
srr03009
]
SerAS9_4511
Messenger RNA biogenesis [BR:
srr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SerAS9_4511
Ribosome biogenesis [BR:
srr03009
]
Prokaryotic type
rRNA processing factors
SerAS9_4511
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
AEF47605
LinkDB
All DBs
Position
complement(4873723..4875192)
Genome browser
AA seq
489 aa
AA seq
DB search
MTAELLVNITPSETRVAYIDGGILQEIHIERESKRGIVGNIYKGRVSRVLPGMQAAFVDI
GLDKAAFLHASDIMPHTECVAGDEQKNFHVRDIAELVRQGQDLMVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGAAHVGVSQRIESEAERERLKKAVAAYCDELGGFIIRTAAEGIGEE
ELSQDAAFLKRLWTKVMERKKRNQTKYKLYGELALAHRILRDFAGAALDRIRIDSRQTHD
QLVEFTGEYIPDITDKLELYAGKQPIFDLYDVENEVQRALERKVELKSGGYLIIDQTEAM
TTVDINTGAFVGHRNLDETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNDEHRRRV
LHSLEQALSKDRVKTTINGFSQLGLVEMTRKRTRESIEHVLCHDCPTCNGRGTVKTVETV
CYEILREIVRVHHAYDSDRFLVYASAAVGEALKGEESHALAEVEIFVGKQVKVQIEPLYS
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgagctactggttaatatcacaccgtctgaaacgcgggttgcctatattgat
ggcggcatcctgcaagagatccacatcgagcgcgaatccaaacgcggcatcgtcggcaat
atttataaagggcgcgtaagccgcgtcttgccgggtatgcaggcggcattcgtcgatatc
ggcctcgacaaggccgccttcctgcacgcctccgatatcatgccgcacaccgaatgtgtc
gccggtgatgagcagaagaatttccacgtgcgcgatatcgccgaactggtgcgccagggg
caggatctgatggtgcaggtggtgaaagatccccttggtaccaaaggcgcgcgcctgacc
accgacataaccctgccttcgcgttatctggtgttcatgccgggtgcggcgcacgttggc
gtctcgcagcgcattgaaagcgaagccgagcgcgagcggttgaaaaaggccgtagccgcc
tactgcgacgagctgggcggttttatcatccgaacggcggcagaaggcatcggcgaagaa
gagctgtcgcaggacgccgcatttctcaagcgcctgtggaccaaggtcatggagcgcaaa
aagcgcaatcagaccaaatacaaactgtacggcgagctggcgttggcgcaccgtattctg
cgcgatttcgccggtgcggcgttggaccggatccgcattgattcgcgtcagacccacgat
caactggtggaatttaccggcgaatacattccggatatcaccgacaagctggagttgtac
gccggcaagcaaccgatcttcgacctgtacgatgtcgaaaacgaagtccagcgggcgctg
gagcgcaaggtggagctgaaatccggcggttacctgatcatcgaccagaccgaggcgatg
accaccgtggatatcaacaccggcgcctttgtcggccaccgtaatctcgacgaaaccatt
ttcaataccaatatcgaagcgacgcaggccattgcccgtcagctgcggctgcgcaacctg
ggcggtattatcatcattgacttcatcgacatgaacaatgacgaacatcgccgtcgggta
ctgcattcgctggagcaggcgttgagtaaagatcgggtaaaaaccacgatcaacggcttc
tctcagctaggcttagtggaaatgacgcgtaaacgcacgcgagaaagcattgaacatgtg
ctgtgtcatgattgtcctacctgtaatgggcgcggcaccgtgaaaacggtggaaaccgtc
tgctacgaaattttgcgtgaaattgttcgcgtacaccatgcttacgattccgatcgtttc
ctggtatacgcctctgcggcggttggcgaagcgctgaaaggcgaagaatcacatgcgctg
gccgaagtggaaatctttgttggcaaacaggttaaggtgcagatcgaacccttgtacagc
caggaacagtttgacgttgtcatgatgtga
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