Serratia plymuthica AS9: SerAS9_4672
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Entry
SerAS9_4672 CDS
T01503
Name
(GenBank) transcriptional regulator, Crp/Fnr family
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
srr
Serratia plymuthica AS9
Pathway
srr02020
Two-component system
srr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SerAS9_4672
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SerAS9_4672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srr03000
]
SerAS9_4672
Transcription factors [BR:
srr03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
SerAS9_4672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HVO_A0261_N
RepL
HTH_24
MarR
HTH_23
MarR_2
Sigma70_r4
HTH_ParB
bAvd
HTH_11
HTH_7
Asp1
RPA_C
Motif
Other DBs
NCBI-ProteinID:
AEF47766
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Position
5036891..5037523
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AA seq
210 aa
AA seq
DB search
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEM
ILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQ
MASRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCS
RETVGRILKMLEDQNLISAHGKTIVVYGTR
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggttctcggcaaaccgcaaacagaccctacactcgaatggttcctgtctcattgccat
atccacaaatatccatccaaaagtacgctgattcaccaaggtgaaaaagccgaaacgctt
tactacatcgtaaaaggctccgtcgcggtgctgattaaagatgaagaaggtaaagagatg
atcctgtcctaccttaaccagggggatttcatcggcgagcttggattatttgaagaaggc
caggagcgtagcgcctgggtcagggcgaaaaccgcctgtgaagtggctgagatttcttac
aagaaattccgccaactgattcaggtcaacccggacatcctgatgcgcctgtcagcgcag
atggcaagccgcctgcaagtgacctcagagaaagtgggtaaccttgctttcctggacgtt
accggccgcatcgcgcaaacgttgctgaacctggcgaaacagcccgatgccatgacccac
cccgacggcatgcagatcaaaatcacccgccaggaaattggtcagatcgtcggttgttca
cgtgaaaccgtcggccgcattctgaaaatgctggaagatcaaaacctgatctccgcccac
ggcaaaaccattgtcgtttacggcacgcgttaa
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