Serratia plymuthica AS9: SerAS9_4886
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Entry
SerAS9_4886 CDS
T01503
Name
(GenBank) transcriptional regulator, LacI family
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
srr
Serratia plymuthica AS9
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srr03000
]
SerAS9_4886
Transcription factors [BR:
srr03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SerAS9_4886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Crp_2
HTH_Tnp_ISL3
MarR_2
HTH_3
HTH_24
MerR
Motif
Other DBs
NCBI-ProteinID:
AEF47979
LinkDB
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Position
5292802..5293830
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AA seq
342 aa
AA seq
DB search
MEHKKELPMATMKDVAEMAGVSTATVSRALMNPEKVSTPTRQKVEQAVLAVGYSPHALSR
NIKRNESRTILVIVPDICDPFFADVIQGIEQTAAQQGYLVLIGDCAQQNQQERTFVNLII
TKQIDGMLLLGSNLPFDASKEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFEAVHYLH
QLGHKQIACVAGPEQMPLSHYRLQGYIQALRRNGINVESSYITRGDFTYEAGAQALTALM
AQPKPPTAIFCHSDVMAIGVLSQAKKMGLRVPQDLSIVGFDDIKLTQYCDPPLTTVAQPR
YEIGRQAMLLLLEQLHGQAVPSGSRLLDSELIIRGSTAAPKR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
ttggaacacaagaaagaattacccatggcaaccatgaaagacgttgccgagatggcgggc
gtttcaacggcaaccgtgtcgcgcgcgctgatgaacccggagaaggtgtcaacgccgacg
cgtcagaaagtggagcaggccgtcttggccgtgggctactctcctcatgccctctcgcgc
aatatcaagcgtaatgaatcccgtaccattctggtgatcgtccccgacatttgcgatccg
ttcttcgccgacgtgatccaggggatcgagcagaccgcggcgcagcaaggctatctggtg
ctgattggcgactgcgctcagcagaaccagcaggaacgaaccttcgtcaatctgattatc
accaagcaaatcgatggcatgctgctgctcggctccaacctgcccttcgacgccagcaag
gaagagcagcgtaatctgccgccaatggtgatggccaacgagtttgccccggagctggaa
ctgccgacggtacacatcgataacctgaccgccgccttcgaggctgtacattatttgcac
cagctcggacacaagcaaatcgcctgtgtcgccggaccggaacagatgccgctcagccat
tatcggctgcaaggctacattcaggcgctacgtcgtaatggcattaacgtcgaaagcagc
tatattacccggggtgatttcacgtacgaagccggtgcgcaggcgctgacagcgctgatg
gcgcaaccaaaacccccgacggcaatattctgccacagtgacgtcatggcaatcggcgtg
ctgtcacaggcgaaaaaaatggggctgcgagtaccgcaggacctttccatcgttggcttt
gacgacatcaagctgacgcagtattgcgatccgccgttaaccacggtggctcaaccgcgc
tatgagatcggccggcaagcgatgctgctgttgttggaacaactgcacggacaggcagta
ccaagtggctcccggctattggacagtgagttaattatcagaggcagcactgctgcccct
aaacgctag
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