Serratia plymuthica AS9: SerAS9_4925
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Entry
SerAS9_4925 CDS
T01503
Name
(GenBank) O-antigen polymerase
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
srr
Serratia plymuthica AS9
Pathway
srr00540
Lipopolysaccharide biosynthesis
srr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SerAS9_4925
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
srr01005
]
SerAS9_4925
Enzymes [BR:
srr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
SerAS9_4925
Lipopolysaccharide biosynthesis proteins [BR:
srr01005
]
Core region
SerAS9_4925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Cytochrom_B561
Motif
Other DBs
NCBI-ProteinID:
AEF48018
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Position
5330235..5331470
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AA seq
411 aa
AA seq
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MLLKETTPHPAFSYLIYLGCAIAFCTIPFGSATGRNLFYISSYISFIAVCLNMKYFVRNK
RNLILPVLFFCVGMSTIFWMNHFKQPGEYINIYRSYMSTGKLLIATAFILLIALNERLCI
QRAFVVVALATGIAVNGYSLYQGLWLDIPRIEINFDRATVAAYLITAINLVMLQAILMLR
SNYRIPLYIIGFLVTFSTLVLTGTRAAMLVYPVAIGLSILATKKLISHKHKILLIASVPL
LLLACGLVFKSQIEQRIAAFQTDMRLIDQPQTENSIISRISMQIVAIRAGSAAPLGQSAE
QRGEEIRAIVAHEPHLSGVMPYINVHLHNELLETYSLKGVWGVLFLLALYVGLFVSSLKP
HRNALLLGVTFSLFVYGLSDVIFFSTEGTAIFCLAIIASVLSMKKMPVSQD
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgctgctaaaagaaacaaccccgcatcccgccttcagctatcttatttatttgggatgc
gctatcgctttttgcactatcccctttggctccgccaccgggcgcaatctgttttatatt
tccagctatatctcgtttatcgccgtctgcctgaacatgaagtattttgttagaaacaaa
agaaacttaattctgccggtcctgtttttctgtgtaggcatgtcgacgattttctggatg
aaccatttcaagcagcccggtgaatacatcaatatttaccgttcctatatgtcgaccggg
aaattgctgatcgctaccgcgtttatcctgttgattgcgttaaatgaacgtctttgcata
cagcgcgcgtttgttgtcgtcgcgctggcgaccggcatcgcggtcaacggttattcgctt
taccaagggttgtggctggatattccgcgtatagaaatcaacttcgatcgcgccactgtc
gccgcctacctgattaccgccatcaatctggtgatgctgcaggcgatactgatgctgcgc
agtaattacagaatccctttgtatatcattggcttcctggttacgttctctacgctggtg
ctcaccggaacgcgagcggccatgctggtctatccggtagcgattggcctgtcgatactg
gcgacgaaaaaactgatatcccataagcacaagatcctgctgatagcctcagtgccgctg
ctgttgctagcctgcggcttggtcttcaaatcacaaatagagcagcgcatcgcggcattt
cagaccgatatgcggctgatcgatcaaccgcagaccgagaactcgattatttcccgcatc
tcaatgcagatcgtcgcaatacgcgccggttcggcggcgccgctgggccaatccgcagaa
caacgcggggaagaaatccgcgccatagttgcccacgagccccatctgtccggcgtcatg
ccttatatcaatgtgcatctgcataacgagctgctggaaacctactcgctcaaaggtgtt
tggggtgtgctgtttttactcgcgctctacgttggcttattcgtcagttctcttaagcca
catcgtaatgcgttattgttaggggtgaccttcagcctgtttgtgtatgggctcagcgac
gtcatattctttagtactgaaggtacggcaattttttgcctggcgattattgccagcgtg
ctttcaatgaagaaaatgccggtttcccaggattga
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