Serratia plymuthica AS9: SerAS9_4973
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Entry
SerAS9_4973 CDS
T01503
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
srr
Serratia plymuthica AS9
Pathway
srr03030
DNA replication
srr03410
Base excision repair
srr03420
Nucleotide excision repair
srr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SerAS9_4973
03410 Base excision repair
SerAS9_4973
03420 Nucleotide excision repair
SerAS9_4973
03440 Homologous recombination
SerAS9_4973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srr03032
]
SerAS9_4973
03400 DNA repair and recombination proteins [BR:
srr03400
]
SerAS9_4973
Enzymes [BR:
srr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SerAS9_4973
DNA replication proteins [BR:
srr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SerAS9_4973
DNA repair and recombination proteins [BR:
srr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SerAS9_4973
NER (nucleotide excision repair)
GGR (global genome repair) factors
SerAS9_4973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Obc1_cap
DUF2529
HHH_2
HHH_5
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AEF48065
LinkDB
All DBs
Position
complement(5381427..5384228)
Genome browser
AA seq
933 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLLQYQPSHVAV
VFDAKGKTFRDDLFAEYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLLVTPGVEADDVIGT
LALEAEKAGHAVLISTGDKDMAQLVTPNVTLINTMNNTILGPQEVCDKYGIPPALIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDALYANLDNIATLNFRGAKTMAAKLEQNK
EVAYLSYKLATIKTDVELDLSCAELEVSPLDVDTLQQLFKQYEFKRWLADVEAGIWLEGK
KGTGAKAVSAAKPAGVVADTPKVAAEATLSQDGYVTILDEKTFADWLKKLKNAEVFAFDT
ETDGLDTLTANLIGLSFAIAPGEAAYLPVAHDYLDAPTQLDRAYVLETLKPLLEDEKALK
VGQNLKFDMGLLARYDITLRGIAFDTMLESYVLDSVGGRHDMDSLSDRYLGHKTVTFEEI
AGKGKKQLTFNQIALEQAAPYAAEDADVTLQLHLAMWPQLKESAELLTVFNEIEMPLLPV
LSHIERTGVLIDQSILAAHSIELTKRLAELEIQAHELAEEPFNLASTKQLQAILYEKQKL
PVLKKTPGGAPSTNEEVLAELALDYPLPKVILEYRGLAKLKTTYTDKLPLMINPFSGRVH
TSYHQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPEGYRIVAADYSQIELRIMAH
LSQDEGLLKAFAAGKDIHRATAAEVFGLPLDKVTNEQRRSAKAINFGLIYGMSAFGLARQ
LGIPRGEAQRYMDLYFERYPGVLEYMERTRQQAAEQGYVSTLDGRRLYLPDVSSSNGMRR
KAAERAAINAPMQGTAADIIKRAMIEVDAWLQGQDEPLVRMIMQVHDELVFEVHESVIEA
SSQRIRELMENSMTLAVPLKVDVGVGANWDEAH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattgcagaaaacccattaatcctggttgacggttcctcttacctctaccgc
gcttatcacgccttccctccgctgaccaattccgcgggcgaaccgaccggagcaatgtac
ggcgtactgaatatgctgcgcagcctgctgttgcagtaccaaccgagccatgttgcggtg
gtgtttgatgccaaagggaaaaccttccgtgatgacctgttcgcagagtacaaatcacat
cggccaccgatgccggacgatctgcgcgctcaaatcgagccactgcacaaaatggtcaag
gccatgggccttccgcttttggtcacgcctggcgtagaagcggatgacgttatcggcacg
ctggctctggaagccgaaaaggccggtcatgcggtgttgatcagcacgggcgataaagat
atggcgcagttggtcacaccgaacgtgacgctgatcaacaccatgaataacaccattctt
ggtccgcaagaggtgtgcgataagtacggcattccgccggcgctgattatcgacttcctg
gcgctgatgggcgactcctcggataacatcccaggtgtgcccggagtgggtgagaaaacc
gcgcaggcgctgctacaggggcttggtgggctggatgcactctatgccaacctggacaac
atcgccacgctcaacttccgtggcgccaagaccatggcagccaagttggaacagaacaaa
gaggtggcgtacctctcctataagctggcgacgattaaaaccgatgtcgagctggatctt
tcctgcgcagaacttgaagtctctccgctggacgttgacacgttgcaacagttgttcaaa
cagtacgaattcaaacgttggctggcggatgttgaagccggtatctggctggaaggcaaa
aaaggcaccggcgcgaaagcggtcagtgcggcgaaacctgccggcgttgtcgcagacacc
ccaaaagttgctgcggaagcgacgctgtcgcaagacggctacgtcaccatattggatgag
aagaccttcgctgattggctcaagaagctgaaaaacgccgaagtatttgccttcgatacc
gaaaccgacggtctggataccctgaccgccaacctgatcggcctgtcctttgccattgcg
ccgggcgaagccgcttatttgccggtggcgcatgactatctcgatgcgccgacgcagttg
gatcgcgcttatgtgctggaaacgctgaaaccgttgctggaagacgagaaggcgctgaag
gtcggtcagaacctgaagtttgatatgggcttgttggcgcgttacgacatcactctgcgc
ggcattgccttcgacaccatgctggaatcctatgtgttggacagcgtgggcggtcgccac
gacatggacagtctgtccgatcgctatctcggccataaaaccgttacttttgaagagatc
gccggtaagggcaaaaaacagctcaccttcaaccagattgcgctggagcaggcggcgcct
tacgcggctgaagatgccgatgtcacgctgcaactgcatttggcgatgtggccgcagttg
aaagaaagcgccgagctgctgacggtgttcaatgagattgaaatgccgctgctgccggta
ctgtcgcatatcgagcgcaccggggtgctgattgaccaaagtattttggccgcccactcc
atcgagttgaccaagcgcctggccgaactggaaattcaggcgcatgaactggcggaagag
ccgttcaatctggcgtcgaccaaacaactgcaggcgatcttgtacgaaaagcaaaagctg
ccagtcctgaagaaaacccctggtggcgcaccatcgaccaacgaagaagtgttggccgag
ttggcgttggattatccgttaccgaaggtgattctggaataccgcgggctggcgaagctg
aaaaccacctacaccgataagctgccgttgatgattaacccgttcagcgggcgggtacac
acctcctaccatcaggcggtgacggccaccggacgcctctcctccagcgatcctaacctg
cagaatattccggtgcgtaacgacgaaggacgccgtattcggcaggcatttattgcccct
gaaggctaccgcatcgtcgcggccgactattcgcagattgaactgcgcatcatggcccac
ctgtcgcaggacgaagggttactgaaggcttttgcggccggtaaagacatccaccgggct
accgccgccgaggtgtttggcctgccgctcgacaaggtgacgaatgagcagcgtcgcagc
gccaaggcaattaactttggtctgatttatggcatgagcgcattcggcctggcacgtcag
ttggggatcccgcgcggcgaagcgcagcgctatatggatctttacttcgagcgttacccg
ggcgtgctggagtatatggagcgcacccgccagcaggctgccgaacagggttatgtcagc
acgctggatggtcgtcgcctctatctgccggacgtcagttccagtaatggcatgcgtcgc
aaggccgccgaacgtgcggcgatcaacgccccgatgcaggggacggctgccgatatcatc
aagcgtgcgatgattgaggtggacgcctggttgcaaggtcaggatgagccattggtgcgc
atgatcatgcaggtgcacgatgaactggtgttcgaggtgcatgagtcagtgattgaagcg
tccagccagcgcatccgcgagttgatggaaaacagcatgacgttggcggtaccgctgaaa
gtggacgtcggcgtgggggctaactgggatgaagcccattga
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