Serratia sp. AS12: SerAS12_0100
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Entry
SerAS12_0100 CDS
T01502
Name
(GenBank) ABC-type transporter, periplasmic subunit
KO
K12368
dipeptide transport system substrate-binding protein
Organism
srs
Serratia sp. AS12
Pathway
srs02010
ABC transporters
srs02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
srs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SerAS12_0100
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
SerAS12_0100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srs02000
]
SerAS12_0100
Transporters [BR:
srs02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
SerAS12_0100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AEF48214
LinkDB
All DBs
Position
111183..112790
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AA seq
535 aa
AA seq
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MTSSLGKTGILKFGIGLIALTVAASVQAKTLVYCSEGSPEGFNPQLFTSGTTYDASSVPI
YNRLVEFKIGTTELEPGLAEKWDVSEDGKTYTFHLRKGVKWQSSKDFKPTRDFNADDVVF
SFERQLDANNAYHKVSGGSYEYFEGMDMPKLIAKIEKVDDNTVRFVLNRPEAPFLADLGM
DFASILSAEYADNMMKAGTPEKVDLNPVGTGPFQLLQYQKDSKILYKAFEGYWGTKPKID
RLVFSITPDASVRYAKLQKNECQVMPYPNPADIARMKQDKTINLMEKPGLNVGYLAFNVE
KKPLDNLKVRQALTLAVNKQAIIDAVYQGAGQAAKNLIPPTMWGYNDAVKDYTYDPVKAK
ELLKEAGMADGFAIDLWAMPVQRPYNPNARRMAEMIQNDWAKIGVKAKIVTYEWGEYLKR
AKAGEHQTVMMGWTGDNGDPDNFFATLYSCAAAKDGSNYSRWCYKPFEDLIQPARAEPNH
DKRVELYKQAQVVMHDQAPALIVAHSTVYEPVRKEVKGYVVDPLGKHHFENVSLD
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttccttgggaaaaacagggattctgaaattcgggattgggctgattgcgttg
accgtagcggccagcgtgcaagccaaaacgttggtttactgttctgaagggtccccggaa
gggttcaacccgcagttgttcacctcgggtaccacctatgacgccagctcggtgcccatc
tataaccgtttggtcgaattcaaaatcggcaccaccgaactggagccgggcctggccgaa
aaatgggacgtcagcgaagacggcaaaacctacactttccacctgcgtaaaggtgtgaag
tggcagagcagcaaagatttcaaaccgacccgcgattttaacgccgacgacgtggtgttc
tcgttcgaacgccagctggacgcgaataacgcctatcacaaagtctccggcggtagctat
gagtactttgaaggcatggacatgccgaagctgatcgcaaaaatcgagaaagtggacgat
aacaccgtgcgcttcgtgttgaaccgcccggaagcgccgttcctggccgatctgggcatg
gacttcgcgtccatcctgtcagccgaatacgccgataacatgatgaaagccggcacgccg
gaaaaagtggacctgaatccggtcggtaccggcccgttccagctgctgcaataccagaaa
gactcgaaaatcctgtacaaggcgttcgaaggctactggggcaccaagccgaagatcgat
cgtttagtcttctccattacgcctgacgcttccgtgcgttacgccaaactgcagaaaaac
gagtgccaggtaatgccgtacccgaatccggctgacatcgctcgcatgaagcaggacaaa
accatcaacctgatggaaaaaccggggttgaacgtcggctacctggcgttcaacgtcgag
aaaaaaccgctggataacctgaaagtgcgtcaggcgctgaccctggcggtcaacaagcag
gcgatcatcgacgcggtgtatcagggggcaggccaggcggccaagaacctgatcccaccg
accatgtggggctataacgacgcggtgaaggattacacttacgatccggtcaaggccaaa
gaactgctgaaagaagccggcatggctgacggtttcgccatcgatctgtgggcgatgccg
gtacagcgtccgtataacccgaacgcgcgtcgcatggctgaaatgatccagaacgactgg
gcgaaaatcggcgtgaaagccaaaatcgtgacctatgagtggggtgaatacctcaagcgc
gccaaggcgggcgaacatcagacggtgatgatgggctggaccggcgacaacggggatccg
gataacttcttcgccacgctgtacagctgcgccgcagcgaaagacggctccaactactcc
cgctggtgctacaagccgtttgaagatctgattcagccggcgcgcgccgaaccgaaccac
gacaaacgcgtagaactgtacaaacaggctcaggtcgtgatgcacgatcaggctccggcg
ctgattgttgcccactccaccgtttatgagcccgtgcgtaaagaagtgaaaggctacgtc
gtggatccgcttggcaagcatcactttgagaatgtctctctagattaa
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