Serratia sp. AS12: SerAS12_0433
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Entry
SerAS12_0433 CDS
T01502
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
srs
Serratia sp. AS12
Pathway
srs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SerAS12_0433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srs03019
]
SerAS12_0433
03016 Transfer RNA biogenesis [BR:
srs03016
]
SerAS12_0433
Enzymes [BR:
srs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SerAS12_0433
Messenger RNA biogenesis [BR:
srs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SerAS12_0433
Transfer RNA biogenesis [BR:
srs03016
]
Prokaryotic type
tRNA degradation factors
SerAS12_0433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
aRib
OB_RRP5_4th
S1_RRP5
KH_2
KH-I_KHDC4-BBP
KH_SLS1_2
UPF0181
Motif
Other DBs
NCBI-ProteinID:
AEF48541
LinkDB
All DBs
Position
480634..482757
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AA seq
707 aa
AA seq
DB search
MLTPIIRKFQYGQHTVTIETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQSFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPDSFLNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGSARVGYINNQYVLNPTTDELKESSLDLVVA
GTAGAVLMVESEADVLSEDQMLGAVVFGHEQQQIVIENINSLVAEAGKPKWDWQAPAVNE
ALHARVAELAESRLGDAYHITEKQERYAQVDAIKSSVVEALLAQDETLDASEIQDILGSV
EKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNLDELMGEKTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAMMPKPED
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEQDNFVVLSD
ILGDEDHLGDMDFKVAGSRDGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISQFAPRIHTIRINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKFAIRRIEEITAEIEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATAPEAGSSAPAPEAE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
ttgctgacaccgatcattcgcaaattccagtatggccagcataccgtcaccatcgagacc
ggtatgatggctcgtcaggccaccgccgccgttatggtgagcatggatgacaccgcagta
ttcgttaccgtagttggccagaaaaaagccaagccaggccaaagcttcttcccactgacc
gttaactatcaggagcgtacttacgctgctggtcgtatcccgggcagcttcttccgtcgt
gaaggccgtccgagcgaaggcgaaaccctgacctcacgcctgattgaccgtccgatccgt
ccactgttcccggacagcttcctgaatgaagttcaagtgatcgcgaccgtagtttccgtt
aacccgcaggtaaacccggacatcgttgcgatgatcggcgcttctgctgccctgagcctg
tccggtattccgttcaatggcccaatcggctctgcacgcgtgggttacatcaacaatcag
tacgtgctgaacccaacgaccgacgagctgaaagaaagcagcctggacttggtcgttgcc
ggtaccgctggcgcagtgctgatggttgaatccgaagctgacgttctgagcgaagatcag
atgctgggcgcggtggtgtttggccacgagcaacagcagattgttatcgaaaacatcaac
tccctggttgccgaagccggcaagcctaagtgggactggcaggcacctgcagtcaacgaa
gcgctgcacgcgcgcgttgcagaactggcagaaagccgtctgggcgacgcttatcacatc
accgagaaacaagagcgttacgctcaggtagatgcgatcaagagcagcgtagttgaagcc
ctgctggcacaggacgaaaccctggacgcgtctgaaattcaggacatcctgggcagcgtt
gagaaaaacgttgtacgtagccgcgtgctgcgtggcgagccgcgtatcgacggccgtgaa
aaagacatgatccgtggtctggacgtgcgcaccggcgtgctgccgcgtacccacggttcc
gcactgttcacccgtggcgagactcaggctctggttactgcaacgctgggcaccgcccgt
gacgcgcaaaacctggatgagctgatgggtgagaaaaccgacagcttcctgttccactac
aacttccctccgtactccgtaggtgagaccggtatggtgggttcgcctaaacgtcgtgaa
attggtcacggtcgcctggcgaaacgcggtgtattggctatgatgcctaaaccagaagat
ttcccgtacacggtgcgtgtggtttctgaaatcaccgaatccaacggttcttcttcaatg
gcttctgtctgtggtgcctctctggcgctgatggacgcaggcgtgccaatcaaggcagcc
gttgcgggtatcgcaatgggcctggttaaagaacaagataactttgtcgttctgtccgac
attctgggtgacgaagatcacctgggcgacatggacttcaaagtagccggtagccgtgac
ggtattaccgcgctgcagatggacattaaaattgaaggcatcacccgcgaaatcatgcag
gtggcactgaaccaggccaagggcgcgcgtctgcacatcctgggcgtgatggaacaggct
atcagcaccccgcgtggcgatatctctcagttcgcaccacgtatccacactatccgaatc
aacccggacaagatcaaagacgtgatcggtaaaggcggctctgtcatccgtgcgctgacc
gaagagaccggcactaccatcgaaatcgaagatgatggtacggttaaaattgctgctacc
gacggtgagaaagccaagttcgctatccgccgcatcgaagagatcaccgcagagatcgaa
gtgggccgtatttaccaaggtaaagtgactcgtatcgttgatttcggcgcattcgtggcg
atcggtggcggtaaagaaggtctggtgcacatctctcaaatcgctgacaagcgcgttgag
aaagtgaccgactatctgcagatgggtcaggaagtaccggttaaggtactggaagttgac
cgtcagggccgtgtgcgtctgagcatcaaagaagctacagcgccagaagcaggttcatct
gcacctgcgcctgaagcagaataa
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