Serratia sp. AS12: SerAS12_0477
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Entry
SerAS12_0477 CDS
T01502
Name
(GenBank) transcriptional regulator, LacI family
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
srs
Serratia sp. AS12
Brite
KEGG Orthology (KO) [BR:
srs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srs03000
]
SerAS12_0477
Transcription factors [BR:
srs03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SerAS12_0477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_3
HTH_31
HTH_IclR
Peripla_BP_4
HTH_23
HTH_7
MarR_2
HTH_Tnp_ISL3
AAA_18
HTH_Crp_2
SpoIIID
MarR
HTH_AraC
HHH
Xre-like-HTH
CENP-B_N
TrmB
HTH_26
Motif
Other DBs
NCBI-ProteinID:
AEF48584
LinkDB
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Position
complement(522602..523549)
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AA seq
315 aa
AA seq
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MQNRLTIKDIARLSGVGKSTVSRVLNNEGSVSPQTRERVEAVIRQQGFTPSKSARAMRGQ
SDKVVGIIVSRLDSPSENQAVRTMLPLLYQQGYDPIVMESQFETRLVEEHLHVLQQRNVD
GVILFGFTGLTAAMLSPWQEKMVVLAREYDGFSSVCYDDDGAVRLLMERLQQQGHRHISY
LGVQLADATTGLRRHQAYLDACRQQRITPSVALGELSYQSGFQLAAEVIGPQTTALVCAS
DTIALGAIKYLQQQHIAPLQVCGIGNTPLLNFLFPETFSVELGYGSAGLQAAQQLLGQLS
GEQGIRQIIVPSKLA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccggctgaccatcaaggacatcgcccgcctgagcggcgtggggaaatccacc
gtatcgcgcgtattgaacaacgaaggcagcgtgagcccgcaaacccgtgaacgggtagaa
gcggtgatccgccagcaggggtttacgccgtccaaatcggcgcgcgccatgcgcgggcag
agcgacaaagtggtggggattatcgtttcccgcctcgattcgccgtcggaaaaccaggcg
gtgcgcaccatgctgccgctgctgtatcagcagggttatgacccgatcgtgatggaaagc
cagtttgaaacccgcctggtggaagagcatctgcacgtgctgcaacagcgcaatgtcgac
ggggtgatcctgttcggtttcaccggcctgacggcggccatgctcagcccctggcaggaa
aaaatggtggtgctggcgcgcgaatacgacggtttttcatcggtttgctacgacgacgat
ggtgcagtccggctgctgatggaacgcctgcaacagcagggccaccggcatatcagctat
ctgggggtgcaacttgccgatgccaccaccggcctgcgccgccatcaggcttatctcgac
gcctgccgccagcagcggatcaccccgagcgtcgccttgggcgaactgagctaccagagc
ggttttcaactggccgccgaagtgattggcccgcaaaccaccgcgctggtgtgcgcctcc
gacaccatcgccctcggcgccatcaaatacctgcaacagcagcacatcgccccgctgcaa
gtctgcggcatcggcaatacgccgctgcttaacttcctgttccccgagacgttttcggta
gaactgggctacggcagtgccgggttgcaggccgcccaacaactgctgggccagctcagc
ggcgaacagggcatccgccaaatcatcgtgcccagcaaactcgcctga
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