Serratia sp. AS12: SerAS12_0664
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Entry
SerAS12_0664 CDS
T01502
Name
(GenBank) RNA polymerase-associated protein rapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
srs
Serratia sp. AS12
Brite
KEGG Orthology (KO) [BR:
srs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srs03021
]
SerAS12_0664
Transcription machinery [BR:
srs03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
SerAS12_0664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
COG2_N
Motif
Other DBs
NCBI-ProteinID:
AEF48771
LinkDB
All DBs
Position
complement(740586..743492)
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVALDVRMVTLLFPATGENRLYARSDSPITRVMFNPGDT
ISNHEGWELQVEEVKEDNGLLTYIGTRLDTQESGVAMREVLLDSKLTFSKPQDRLFAGQI
DRMDRFALRFRARKYQSEQYRLPFAGLRGMRASLIPHQLHIAYEVGQRHAPRVLLADEVG
LGKTIEAGMIIHQQLLAGRAERVLIVVPETLQHQWLVEMMRRFNLYFSLFDDSRYSEAKL
DSSNPFETEQLVICSLDFVRRNKQRLEELADAQWDLLVVDEAHHLAWSEDAPSREYQVIE
QLAEHIPGVLLLTATPEQLGQQSHFARLRLLDPSRFHDYQEFVSEQQKYRPVADAVTLLL
SGERLADDKLNMLGELIDEQDIEPLLKAANSDAEGAEQARQELVTMLMDRHGTSRVLFRN
TRNGVKGFPHRNLHQIKLQLPTQYQTAIKVSGIMGAKKTVEARARDMLYPEQIYQEFEGE
NATWWNFDPRVEWLLDYLVANRDKKVLVICAKADTALQLEQVLREREAIRAAVFHEGLSI
IERDRAAAYFASEEDGAQVLLCSEIGSEGRNFQFASHLVMFDLPFNPDLLEQRIGRLDRI
GQMHEIEIMVPYLENTAQAVLVRWFHEGLDAFEHTCPTGRTIYDSGYEQLLGFLAAPTEH
EGLDEFIHACRQQHDHLKAQLEQGRDRLLEMHSNGGEKAQALAEAIANQDNDVNLVGFAL
NLFDIVGINQDDRSDNLIVLTPSDHMLVPDFPGLPQDGCTVTFDREQALSREDAQFVSWE
HPIIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLVELVYVVEAQAPKHLQLTRFLPPTP
IRMLMDRKGTNLAAQVEFESFNRQLNAVNRHTSSKLVNAVQQDVHAMLQQAESLVEDQAR
ALIEQAKQEADDKLSTELARLEALKAVNPNIRDDEVEALEFNRKQVLVNLNEAGWRLDAI
RLVVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacggaaagcgaattaggtctggga
accgtcgtggcgctggatgtgcgcatggttaccctgcttttccccgccaccggtgaaaac
cgcctctatgccagaagtgactcgccaatcacccgcgtgatgttcaatccgggcgacacc
atcagtaaccacgaagggtgggagctgcaggtagaagaggtcaaagaggataacggcctg
ctgacctatatcggcacccgcctggacacccaggaaagcggcgtggcgatgcgcgaagtg
ctgttggacagcaaactgaccttcagcaagccgcaggaccgtctgtttgccggccagatc
gaccgtatggatcgcttcgccctgcgttttcgcgcgcgtaaataccagagcgagcagtat
cgcctgccgttcgccggcctgcgcggcatgcgggccagcctgatcccccaccagttgcac
atcgcttatgaagtcgggcagcgccatgcgccgcgcgtactgctggcggatgaggtcggt
ctggggaaaaccatcgaagccgggatgatcatccatcagcaactgctggcgggccgcgcc
gagcgcgtactgatcgtggtgccggaaacgcttcaacaccagtggctggtcgaaatgatg
cgccgcttcaacctctatttctcgctgttcgacgacagccgttattcggaagccaaactc
gacagcagcaatccgtttgaaaccgaacagttggtgatctgctcgctggacttcgtgcgc
cgcaacaagcagcgcctggaagagctggcggacgcccagtgggatctgctggtggtcgat
gaagcccaccacctggcctggagcgaagacgcgccgagccgcgaataccaggtcatcgaa
cagctggcggaacacatccccggcgtactgctgctgaccgcaaccccggagcagcttggc
cagcaaagccacttcgcccgtctgcgcctgttggatccgagccgtttccacgattaccaa
gaattcgtcagcgaacagcaaaaataccgcccggtcgccgatgccgtcaccctgttgctg
agcggcgagcgtctggccgatgacaagctgaacatgctgggcgaactgatcgacgagcag
gacatcgaaccgctgctgaaggccgccaatagcgacgccgagggtgcagaacaggcgcgc
caggaactggtcaccatgctgatggaccgccacggcaccagccgcgtgctgttccgcaac
acccgcaacggcgttaaaggcttcccgcaccgcaatctgcaccagatcaagctgcaactg
ccgacccagtaccagactgcaatcaaagtgtccggcatcatgggggcgaagaaaacggtt
gaagcacgcgcgcgcgacatgctgtacccggagcaaatctaccaggagttcgaaggcgag
aacgccacctggtggaactttgatccgcgcgtagagtggctgctggactacctggtcgcc
aaccgcgataagaaagtgctggtgatctgcgccaaggccgacaccgcgctgcaactggaa
caggtgctgcgtgagcgtgaagcgatccgcgccgcggtgttccacgaagggctgtcgatt
atcgagcgtgaccgcgccgccgcctacttcgcctcagaagaagacggtgcccaggtgttg
ctgtgctcggagatcggttccgaaggccgtaacttccagttcgccagccacctggtcatg
ttcgacctgccgttcaacccggatctgctggagcagcgtatcggccgtctggaccgtatc
ggccagatgcatgaaattgaaatcatggtgccgtacctggaaaacaccgctcaggcggtg
ctggtgcgttggttccatgaagggctggatgcctttgagcacacctgcccgaccggccgc
accatttatgacagcggctacgagcagttgcttggcttcctggctgcgccgaccgaacat
gaagggctggacgaattcattcacgcttgccgccaacagcacgaccacctcaaggcgcaa
ctggagcagggccgcgatcgcctgctggaaatgcactccaacggcggcgagaaagctcag
gcactggcggaggccatcgccaatcaggacaacgacgtcaatctggtgggctttgcgctt
aacctgttcgacatcgtcggcatcaaccaggacgatcgcagcgacaacctgattgtgctg
acgccttccgatcacatgctggtaccggacttccctggcctgccgcaagacggctgcacc
gtcaccttcgatcgcgagcaggctctgtcgcgtgaagacgcgcagttcgtcagttgggaa
cacccgatcatccgtaacggcctggacctgatcctgtccggcgataccggcagctgtgcg
gtgtctctgttgaaaaacaaggcgctgccggtcggcaccttgctggtcgaactggtgtac
gtggtggaggcgcaggcgccgaaacacctgcaactgacccgcttcctgccaccgacacca
atccgcatgctgatggaccgcaaaggcaccaacctggcggcgcaggtcgaattcgaaagc
ttcaaccgccaattgaacgcagtcaaccgccatacctccagcaagctggtcaacgccgta
cagcaggacgtacacgccatgctgcaacaggcggaaagcctggttgaagaccaggcgcgc
gcgctgattgaacaggcgaaacaggaagcggacgacaagctgagcaccgaactggcgcgt
ctggaagcgctgaaggcggttaacccgaacatccgtgatgacgaagtggaagcgctggag
ttcaaccgtaaacaggtgctggtcaacctgaatgaagcgggatggcgtctggacgctatc
cgtctggtggtggtcactcaccagtaa
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