Serratia sp. AS12: SerAS12_1395
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Entry
SerAS12_1395 CDS
T01502
Name
(GenBank) urea carboxylase
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
srs
Serratia sp. AS12
Pathway
srs00220
Arginine biosynthesis
srs00791
Atrazine degradation
srs01100
Metabolic pathways
srs01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
srs00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
SerAS12_1395
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
SerAS12_1395
Enzymes [BR:
srs01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
SerAS12_1395
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
ATP-grasp_5
RimK
NQRA_N
PTS_EIIA_1
RnfC_N
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
AEF49483
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All DBs
Position
1511258..1514881
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AA seq
1207 aa
AA seq
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MFTTVLIANRGEIACRAIRTLKRLGVTSVAVYSDADRNAPHVTEADLAVALGGEKAADSY
LCIDKILAAAVETGAQAIYPGYGFLSESAEFADACEATGIAFIGPTAAQIREFGLKHRAR
ELAAVAQVPMTPGTGLLDSIEEAVTAAARIGYPVMLKSTAGGGGIGLTRCDDETALREAY
DSVKRLGEQFFRDSGAFIERFVDQARHVEVQIFGDGQGRVVALGERDCSLQRRNQKVVEE
TPAPNLPAATRQALHQAAVALGESVNYRSAGTVEFIYDGARDEFYFLEVNTRLQVEHPVT
EMVTGLDLIECMLQVAAGDALDWAALQRAPQGASIEVRIYAEDPLKNFQPSPGVLTEVHF
PDNVRVDGWVATGSEVSAFYDPMIAKLIVHGEDRQQALEKMRAVLGATRLHGIATNLDYL
RQVIATAQFQSGEVWTRMLDSFRFQPSSIEVLQPGTYSSVQDYPGRLGYWDIGVPPSGPM
DDFAFRLANRIVGNHPSAAGLEFTLQGPTLRFHCDATIALTGADCPANLDGEAVAYWQPV
AVRAGQVLTLGRAVHGCRTYLAVRNGFDVPVYLGSRSTFALGQFGGHAGRTLRVADMLAV
SQPALATSTTPAPIAAPQAMDDSLIPQYGSLWNIGVLYGPHGAPDFFTPESIDTFFAAEW
QVHYNSNRLGVRLSGPKPGWARQDGGEAGLHPSNVHDCEYAIGSINFTGDFPVILTRDGP
SLGGFVCPVTIAKAELWKVGQVKPGDRIRFHPIGFKQAQSLEQAQLGSIEALAAVKAITL
PTPDLTPGATASAAIVAALPAGDGRPSVVYRQAGDGYILMEYGDNLLDLALRLRIHLLMQ
SLKQGAIPGVEELAPGVRSLQIRYDSRTIGQADLLQRLLAREQALGDVSRLKVPTRTVYL
PMAFEDSATLGAVERYSQTVRSSAPWLPNNVDFIQRINGLSHREQVRDIIFDASYLILGL
GDVYLGAPCAVPIDPRHRLLSSKYNPARTHTAEGTVGIGGMYMCIYGMDSPGGYQLVGRT
LPIWNKFLKNPQFNAGEPWLLHFFDQVRFYPVSEQELDEQREAFREGRAQVRIENSEFDF
AEYTRFLADNAEDIAAFQQRQQQAFSHEVTLWQAQESEAEAQLLPPQNDEEEVDGYLVSA
DLNGNVWKILVEPGQAVEAGQPLIVVEAMKMELAVTAPRAGIIKRIGCQQGRPVGPGDAL
LWLEHAS
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccactgtattgatagccaaccgcggcgaaattgcctgccgcgcgatccgtact
ctgaaacgtctgggggtgaccagcgtggcggtctattccgatgccgaccgcaatgcgcca
catgtcaccgaggctgatctggcggtggcgctcggcggcgaaaaggccgccgacagctac
ctgtgcattgataaaatcctcgccgccgcagtggaaaccggcgcgcaggcgatctatccc
ggctacggttttctctccgagagcgccgaattcgccgatgcgtgcgaagcgacgggcatc
gcctttatcgggccgacggcggcgcagatccgtgagttcggcctgaagcaccgggcacgt
gaactggcggcggtagcgcaggtgccgatgacgccgggcaccggcctgctggacagcatt
gaggaagcggtcactgccgccgcgcggattggctacccggtcatgttgaaaagcaccgcc
ggcggtggcggcattggtctgacgcgctgtgacgacgaaacggcgctgcgcgaagcttac
gacagcgtaaagcggctgggtgagcagttcttccgcgactccggggcttttatcgagcgt
tttgtcgatcaggcgcgccatgtggaagtacaaatctttggcgatggtcagggccgggtg
gtggcgcttggcgaacgcgattgctcgttgcagcgccgtaaccagaaggtggtggaagaa
accccggcaccgaacctgccggcggcgacccgtcaggcgctgcatcaggcggcggtagcg
ctgggtgaatcggtgaattaccgcagcgccggcaccgtggagtttatctacgacggcgcg
cgcgacgagttctatttcctcgaggtaaacactcgcttgcaggtggaacatccggtgacc
gaaatggtgaccgggctggatctgatcgagtgcatgttgcaggtggcggcgggcgatgcg
ttggactgggcggcgctgcaacgcgcaccgcagggggcctcgatcgaggtgcgcatctat
gccgaagatccgctgaaaaacttccagcccagccccggcgtgctgaccgaggtacatttc
ccggataacgtgcgcgtcgacggctgggtggcgaccggcagtgaagtgtcggcattttac
gacccgatgatcgccaaactgatcgtccacggcgaagatcgccaacaggcgctggagaaa
atgcgcgcggtgctcggcgctacccgtttgcacggcatcgccaccaacctcgattacctg
cgccaggtgatcgccacggcgcaattccagagcggcgaagtctggacccgcatgctggac
agcttccgtttccagcccagcagcattgaagtgctgcaaccgggcacctacagcagcgtg
caggattatccgggccgtcttggctattgggatatcggcgtgccgccttccgggccgatg
gacgatttcgctttccggctggccaaccgcattgtcggcaatcacccgagcgccgccggg
ctggagtttactttgcaggggccgaccttgcgcttccactgcgacgcgaccatcgccctg
accggcgccgactgcccggcgaacctggatggggaagcggtagcctactggcagccggtt
gcggttcgggccgggcaggtactgaccttaggccgcgccgtgcacggttgccgcacttat
ctggcggtgcgtaatgggttcgacgtgccggtgtatttgggcagccgctcgaccttcgcc
cttgggcagtttggcggccacgccgggcgcaccctgcgggttgccgatatgctggcggta
tcccagcctgcgctggctaccagcaccaccccggcgcccatcgcggcgccgcaggcgatg
gacgacagcctgatcccgcaatacggcagcctgtggaacatcggcgtgctttatggcccg
cacggcgcgccggacttctttaccccggagtcgatcgacaccttctttgccgccgaatgg
caggtgcactacaactccaatcggctgggcgtgcgcctgtcggggccgaaacccggctgg
gcgcggcaggacggcggtgaagccgggctgcatccttctaacgtacatgactgcgagtac
gccatcggctcgattaatttcaccggcgatttcccggtgatcctcacccgtgacgggccg
agcctcggcggttttgtctgcccggtgaccatcgccaaagccgaactgtggaaggtgggc
caggtgaagccgggcgaccgcattcgcttccatcctatcggtttcaaacaggcgcaatcg
ctggagcaggcgcagcttggcagtatcgaagcgttggcggcggtgaaggcgataaccctg
ccgacgccggatctgacgccgggcgccacggcttctgcggctatcgtcgccgcgttgccg
gccggagacggccgcccctcggtggtctatcgccaggccggggacggctacattttgatg
gagtacggcgacaacctgctcgatctggcgttgcgtctgcgtattcatctgctgatgcaa
tcgctcaaacagggcgcgatccccggcgttgaggaactggctccgggcgtgcgttcgctg
cagatccgttacgacagccgcactatcggccaggccgatttgctccagcgcctgctggcg
cgtgaacaggcactgggcgacgtcagccgcctgaaggtgccgacgcgcacggtttatctg
ccgatggcgtttgaagactccgccaccctgggcgccgtggaacgctatagccaaacggta
cgcagctctgcgccctggctgccgaacaacgtcgattttatccagcgcatcaatggcctc
agccaccgcgaacaggtgcgcgacattatcttcgacgccagctatttgatcctcgggttg
ggcgatgtctatctcggcgcgccgtgcgcggtgccgattgatccgcgccaccggctgctc
agctccaaatacaacccggcgcgcacccacaccgccgaaggcacggtcggtatcggcggc
atgtacatgtgcatttatggcatggactcgccgggcggctatcagttggtcgggcgcacg
ctgccgatctggaacaaattcctcaaaaacccgcagttcaacgccggagaaccctggttg
ctgcacttcttcgatcaggtgcgtttttacccggtcagcgagcaggaactggatgagcag
cgcgaggcattccgtgaagggcgcgcacaggtccgcatcgaaaacagcgaattcgacttt
gccgagtacacccgtttcctggcggacaacgccgaagacattgccgcattccagcagcgc
cagcagcaggcattcagccatgaagtgacgctctggcaggcgcaagagagcgaggccgag
gcgcaattgctgccgccgcagaatgatgaggaagaggtcgacggctatctggtcagcgcc
gatctgaacggcaacgtgtggaagatcctggtggaaccggggcaggcggtggaagccggc
caaccgctgattgtggtcgaggcgatgaaaatggaactggcggtcaccgcgccgcgcgcc
gggatcatcaaacgcatcggttgccagcaagggcggccggtggggccaggcgacgctttg
ctgtggctggaacacgccagctga
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