Serratia sp. AS12: SerAS12_1946
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Entry
SerAS12_1946 CDS
T01502
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
srs
Serratia sp. AS12
Pathway
srs00541
Biosynthesis of various nucleotide sugars
srs01100
Metabolic pathways
srs01250
Biosynthesis of nucleotide sugars
Module
srs_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
srs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SerAS12_1946
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
srs01005
]
SerAS12_1946
Enzymes [BR:
srs01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
SerAS12_1946
Lipopolysaccharide biosynthesis proteins [BR:
srs01005
]
Lipid A
SerAS12_1946
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
MjAgo_N-like
Motif
Other DBs
NCBI-ProteinID:
AEF50024
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Position
2096283..2097137
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AA seq
284 aa
AA seq
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MKQKVVSIGDINVANDLPFVLFGGMNVLESRDLAMSICEHYVTVTQKLGIPYVFKASFDK
ANRSSIHSYRGPGLEEGMRIFEEIKKTFGVKIITDVHEASQAQPVSEVVDVIQLPAFLAR
QTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGNDQVILCDRGSNFGYDNLVVD
MLGINVMKNVTGGHPVIFDVTHALQTRDPFGAASGGRRAQVAELARAGMAVGLAGLFIEA
HPEPNSAKCDGPSALPLDKLEPFLVQMKAIDDLVKSFPELDTSN
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagaaagtagttagcattggcgacatcaacgtagcgaacgatctgccgtttgtg
ctgtttggcgggatgaacgtgctggaatcgcgcgatttggcgatgagcatctgcgagcac
tacgtcaccgtgacgcaaaaactgggcattccttacgttttcaaagcctcttttgataaa
gccaaccgttcttccattcactcgtaccgtggtccgggcttggaagaggggatgagaatc
ttcgaagaaatcaaaaaaaccttcggcgtgaaaatcatcaccgacgtgcacgaagcgtca
caggcgcagccggtatccgaagtggttgatgttatccaactgccggcattcctggcgcgc
cagaccgatctggttgaagctatggcgaaaaccggcgcggtgatcaacgtcaagaagcca
cagttcgtcagcccaggccaaatgggcaacatcgtcgacaagttcaaggaaggcggtaac
gatcaggtgatcctgtgcgatcgcggcagcaactttggttacgataacctggtggtcgac
atgctcggcatcaacgtaatgaagaacgtgaccggtggccacccggtgatcttcgacgtt
acccacgccctgcagacccgtgacccgtttggcgccgcttccggcggtcgtcgtgcgcag
gttgccgaactggcgcgcgccggtatggcggtggggctggccggtctgtttatcgaagca
cacccggagccgaacagtgccaagtgcgacggcccatccgcgttgccgctggacaagctg
gagccgttcctggtgcagatgaaagccatcgacgatctggtgaagagcttcccagagctg
gataccagcaactaa
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