Serratia sp. AS12: SerAS12_2404
Help
Entry
SerAS12_2404 CDS
T01502
Name
(GenBank) RHS repeat-associated core domain protein
Organism
srs
Serratia sp. AS12
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
AEF50480
LinkDB
All DBs
Position
2580658..2585754
Genome browser
AA seq
1698 aa
AA seq
DB search
MGNKNNLDVKVLENQAANLKVKANLLAASSGEPGYSNAPTYSALGYEVDPRTGTLQVTLS
PPTFFGPLGSNITPSIVYSPQSIASGITLLGLPLGWSYSFSYIAASQVFINGSSAYYIDD
MYDSGLRYYNLKDLVFTNDSGTFPYDNQLTYSNTLQFISGETQYFDAHGRLIGMVDRWGN
PAIFYYTKEGDVYSSKLSSIVGFAGQAITFAYSGEGIEIAYPQGGKNDISFAYLVDSQSY
LVGYVNPLGQKFTIANRGGLVRNDLISQITYPNNVSVVYEYSTLRYYVDANRSQFYRIDC
IAATRQSYVDTAGQIQTRSVSYSYDPNGDAHDYTGYPTYVMGKYQDTLLQSNDDDYRYVS
QVDDGVLVVEHQYNRLHLELVTKTFTKDAPRRLIRQVTNTFISETDGKYFPPYYELKLIP
NYQTPIKVVTEIYNDPGETLISEIESDFDDYGAPTEVRSYSSRVAGEAPKLLNKVQTLYD
YAGYGQLVRQDTYDCTDGTILRRIANDLTGDKKNIATSTDGFVVSADGKDIFSPNKKITY
RYNASGKVVYEKLEWADGESHALESTETSTRYALAVPILTVTTTNAQGIPNTTEIDTVTG
WMISQANALNYGSSYTYDNIGRQLTSTDPMGVVTACIFDDPVNKATTRYANGYETYAYNN
GFTDLVKTADNGGNDKAERTLTANGYNDKGQLIWTEGILGADSRILYTYDSRNQLVTATD
ALGNVNRYEYDTVDQTKTEFFNGVKVSTLSKHDNVLDEVTYSSLLSSESLSAMSLSNSYS
NIIKSLTGEPSAGKEWLAASFQYDVNNQVSSYSATGSDDIVQRQDISRDLFTNAVFTGVD
VSAPETKASTAGGDTYFYDNLNQLLTDTNALGQQYTYVYNEIGLVSRYTDYAGTVFACGY
NANNQLVSVAWTDQGAQCKKQYTYDPLTYKVRSIEEFRQGVSNGSIAYGYSLGGAIESVT
YPDGKKILYEYDLGTGLLSTFTDAIGKVTQYTYDNYGRVTRQQIVGEEYSVQTDYYSKEE
SAANSGKLKSIRVSNGISSSFSYDGFGSLAQAVIIDTSEGATHPVLLETQYSYDPITRNL
VTLQSSSGAFAQDANLNYLANYSFNSLNQLTEERKQILGGEVAVTAYRYDAACNVIQEER
RVGATSQSTTYTYDQDNKLLRIDASSGARNFAYDANGNLTGDGTGGTYRYNAQNRLIGYS
DVGGNLVAEYDYYPDGLRASKKVNDGAAIRFYYDYSSSPNIVNEIQGDKTSHYLAHGSKR
YVRLVDSAGITVPEYFIASFRDIVGVLDASCERDASYAYEPYGQEEGASQRLADISVNPF
RYTAEYTDLESSLIYLRARYYHPGIKRFMSRDTTDLINRYNYANGNPIMGSDPSGDLSIG
WVIGAAIAGIAVGLITGGAGALVLGTGMGASIAVGAVAGVAGTAASNGITEWGLHASGEP
GLSAKDWGVSLLAGAVSGAVGAGIGGAVGRGAMSTAMNAGWSAGRVTAVGVLSASVSGGF
SGSVASAGVTAGFEHQAFFSADVWENIGISAAVGMGAGVMASGAHFGFGKVGGIRTTPVE
MSATEFSVVTDTTTPNTILEFNPREANQWQGGNLGAMTAGQDTVIVHGHPRFSFPEDVHG
RYRYASAKTTAQAIQNNIGGGGGTIRLISCSAGKWIGVENMAQTIANTLNRPVEAYTVAI
SIAEVVNGTVTPVTYQPV
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacaaaaataatcttgatgtcaaggtgctcgagaatcaggcggccaacctgaaa
gtgaaagcgaacttgctcgctgcgtcgtcaggcgaacccggatattccaatgccccgact
tatagtgcccttggctatgaggttgatccgcgcacaggcacgctgcaggttaccctttcg
ccgccgactttctttggtcccttgggcagtaacatcacgccttccatcgtttacagcccg
caatctatcgcctcggggatcacgcttcttgggcttcctttgggctggagctattcattc
agttatatcgccgcgagccaggtattcattaatggttcatccgcttactacatcgacgat
atgtatgactcgggtttgcgctactacaacctgaaggatcttgtcttcaccaacgattcg
gggacgttcccttacgataaccagctaacgtacagcaatacattgcaatttatcagcggc
gaaacgcagtatttcgacgctcacggcagattgattggcatggtggaccgctggggcaac
cctgccattttttattacacgaaagagggcgatgtctatagcagcaagctgtccagcatc
gtcgggtttgccgggcaggcgatcaccttcgcttatagcggcgagggcatcgagatcgct
tatccccagggagggaaaaacgatatctcctttgcctatctggtggatagccagagctat
ctggtgggttacgtcaatccgcttgggcaaaagttcaccatcgccaatcggggcgggctg
gtcaggaacgatttgatttctcagatcacttatccgaacaacgtctcggtcgtctatgaa
tactccacgctgcgttattatgtcgatgcgaaccggtcgcagttttatcgtatcgattgc
atcgccgcgacaaggcagagttatgtcgataccgccggacaaatccagacaaggtcggtt
tcctattcctatgaccccaacggcgatgcccacgattacacgggttatccgacgtacgtc
atggggaaatatcaagataccctgctgcaaagcaatgacgacgattaccgctatgtaagc
caggtcgacgatggcgtgctcgttgtggagcatcaatacaatcggctccatctcgagctc
gtgacgaagaccttcaccaaggatgcaccgcgccggcttatccggcaggtcaccaatacg
ttcatcagcgaaaccgacgggaaatactttccgccgtactacgaattaaaactgataccg
aattatcagacccccatcaaggtcgtgaccgagatctacaacgacccgggggaaacgcta
atcagcgagatagaatcggatttcgacgactacggcgcgccgacggaagtccgctcctat
agcagcagagtggcgggcgaggcgcccaaactgctcaataaggtgcaaaccctttacgat
tatgccggctatgggcagcttgtccggcaggatacttacgactgtacggatgggactatc
ctcagaagaatcgccaatgacctgaccggcgacaagaagaatatcgcaacgagcacagac
ggctttgtcgtctccgccgatggaaaagacatatttagcccgaacaagaagatcacttat
cgctacaacgcctcgggcaaggttgtttacgagaagttggaatgggccgatggcgaaagc
catgcgctggagagcacggagacctcgacccgttacgccctggccgttcccatattgacg
gtcaccaccaccaatgcgcaaggcataccgaatacgactgaaatcgatacggtgacgggg
tggatgatcagccaggctaatgccctgaattatggttccagctatacgtatgacaacatc
ggccgccaactgacctcgaccgatcccatgggcgtggtgacggcgtgtattttcgacgac
cccgtcaacaaggccacgacccgatatgccaacggatatgaaacctacgcctataacaat
gggttcacggatttggtcaaaaccgccgacaacggcggtaatgacaaggcggagcgtacg
ctcaccgccaatgggtacaacgacaagggccaattgatctggaccgaaggcatcctgggc
gccgactcccggatcctgtacacctatgacagcagaaaccagttggtcacggcgacggat
gcgctcggcaatgtcaaccgctacgaatatgacaccgtggatcaaaccaagacggagttc
tttaacggcgtcaaggtgagcacgttgagcaagcatgacaatgtgctcgacgaagtcact
tactccagcctgctttcttccgagagcctgtcggcgatgagcctctccaacagctattcg
aacatcatcaagtcactgacgggggagccatcggcaggcaaggaatggctggcggcatcc
ttccaatacgatgtcaataatcaggtcagttcctacagcgcgacaggcagtgacgacatc
gtgcaacgccaggatatttcaagagatttatttaccaatgcggtattcaccggcgttgat
gtcagtgcaccggagacgaaagcgtccaccgcaggcggcgatacctatttttacgataat
ttgaatcagttgctcaccgacaccaatgcgctcggccagcagtacacctatgtctataac
gagatcggcctggtatcccgttacacggattatgcgggaacggtattcgcatgcggctac
aacgccaataaccagttggtatcggttgcatggactgaccagggggcgcagtgcaagaag
caatatacctatgatcccttgacgtataaggtgcggagcatagaagagttccgccagggg
gtgagcaacgggagtattgcgtatggctacagtttgggcggtgcgattgagtcggtgacc
tatcccgacgggaaaaagatcctttatgaatatgacctcggcacggggctgctcagcaca
ttcaccgatgccatagggaaggtcacgcaatatacgtacgacaattatggccgggtaacc
cggcaacagatcgtcggagaggagtacagcgtccagaccgactattacagcaaagaggag
agcgccgccaacagcggcaagctcaagtcgatccgggtcagcaacggcatctcgagcagt
ttctcctatgatggtttcggttctcttgcgcaggcggtcatcatcgatacgtccgagggg
gcgacccatcctgttttgctggagacgcaatattcctacgatccgatcacccgtaacctg
gtcacgctgcaatccagctcgggcgcgtttgcgcaagatgccaatctgaattatctggcg
aactacagtttcaacagcctcaaccagctcacggaagagcggaaacaaatcctgggcggc
gaggttgccgtcacggcgtaccggtatgacgcggcctgcaacgtcatccaggaagaacgc
agggtcggcgcgacaagccagtcgacgacctatacctacgatcaggacaacaagttattg
cgcatcgacgcctcgtccggcgcaagaaacttcgcctacgacgccaatggcaatttgacc
ggcgatgggacgggcggcacatatcgctacaatgcgcaaaacaggttgattgggtatagc
gatgtcggcggcaatctggtcgccgaatacgattactaccccgatgggctgcgggccagt
aaaaaggtcaatgatggcgcggcgatacggttttattacgattattcctcatcccccaat
atcgtcaatgagatacagggcgataaaaccagccactacctggcgcacggaagcaagaga
tacgttcgcctggtcgacagcgcagggatcaccgtccccgaatatttcatcgcctccttc
agggacatcgtcggcgtcctcgatgcttcctgcgagagggatgccagctacgcttacgaa
ccctatgggcaagaagaaggtgccagtcaacggcttgccgatatcagcgtaaacccattc
agatataccgccgaatataccgatctcgagtcttccctgatctatctgagggcgcgttac
taccatcccggcatcaagcgcttcatgagccgggataccaccgaccttatcaaccgctac
aactatgcgaatggcaatcccattatgggcagcgatcccagcggggatttgagcatagga
tgggtgatcggtgcggctatcgcgggcatcgccgtagggcttatcacgggcggcgcaggc
gcattggtcctgggtacgggcatgggcgcctcgatcgcagtcggcgcggtggcgggcgtg
gccggtacggcggccagtaatggcatcacggaatggggtctccatgcgagcggcgaacct
ggattgagcgccaaggattggggcgtcagcctgctggcgggggcagtctccggcgcagtc
ggagccggcatcggcggcgcggtcggtcgtggagcgatgagcaccgcgatgaatgcgggc
tggtcggccgggagagtcacggccgtcggtgtcctgtcggcttcagtgtccggcggtttc
tccggctcggtggcatccgccggcgtcactgccggcttcgaacatcaggcattcttcagc
gccgacgtgtgggaaaacatcggcatcagcgccgcggtcggcatgggagccggcgtgatg
gcttcgggcgcgcatttcggtttcgggaaagtcggtggcatccgtaccacgcctgtggag
atgagtgccacggagttcagcgtcgttacggacacgaccacgcccaataccattcttgag
ttcaatccccgagaagccaatcaatggcaaggtggtaatctgggggcgatgaccgcaggg
caggatacggtgatcgtgcatgggcacccgcgattctcgttccctgaggatgtgcatggc
cggtatcggtatgcttccgccaagaccacggcccaggcgatacagaataatatcgggggc
ggcgggggcaccatcagactgatttcttgttccgccgggaaatggataggcgtggaaaac
atggcgcaaaccatagccaatacgctcaataggccggtggaggcctataccgttgccatt
agcattgctgaggtggtcaatggcacagtgacgcctgtcacttatcagcctgtctag
DBGET
integrated database retrieval system
