Serratia sp. AS12: SerAS12_3394
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Entry
SerAS12_3394 CDS
T01502
Name
(GenBank) type III restriction protein res subunit
KO
K19789
DNA repair protein RadD
Organism
srs
Serratia sp. AS12
Brite
KEGG Orthology (KO) [BR:
srs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srs03400
]
SerAS12_3394
DNA repair and recombination proteins [BR:
srs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
SerAS12_3394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
DUF7577
AAA_30
zf-tcix
AAA_16
Zn_ribbon_3
AAA_22
SLFN-g3_helicase
AAA
Motif
Other DBs
NCBI-ProteinID:
AEF51455
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Position
3622385..3624142
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AA seq
585 aa
AA seq
DB search
MAFTLRPYQLEAVEATIKHFRRHSQPALIVLPTGAGKSLVIAELAKRARGRVLVLAHVKE
LVAQNHAKYCAYGLEADIFAAGLQQKDSAGKVVFGSVQSVARNLPLFDGAFSLLIIDECH
RISDDDDSQYQQIIQHLQKSNPQLRLLGLTATPYRLGKGWIYQYHYHGFTRGDAGSLFRD
CIYELPLRYMIKNGYLVPPERLDMPIVQYDFSRLEARSNGLFSEIDLNRELKQQNRITPH
IISQIVEYAETRKGVMIFASTVEHAREIHGLLPAGEAALVSAETPAAERDALIEAFKQQR
LRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKEDCLILDYAGNP
HDLFTPEVGVSKPHSDSQPVQVFCPGCGFANLFWGKCTENGDIIEHYGRRCQGWLEDDDG
HREQCDYRFRFKSCPHCGAENDIAARRCHQCQEVLVDPDDMLKEALKLKDALVLRCGGME
LQSGRDEKGEWLKATYYDEDGTSTSERFRLQTPAQRKAFEMLFLRPHQRAPGVPFSWQTA
ADVLAQQALLRHPDFVVARKRGQFWQVREKVFDYQGRFRRANELY
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcctttactctacgcccctaccaactggaagcggtcgaagccaccatcaaacatttc
cgccggcattcacaaccggcgctgattgtgctgccgaccggtgcaggcaaaagcctggtg
atcgccgaactggcgaagcgcgcacgcggccgggtattggtgctggcccacgtgaaagag
ctggtagcgcaaaatcacgccaaatactgcgcctatggcctggaggcggatatctttgcc
gccgggctgcagcaaaaagacagcgccggcaaagtggtgttcggcagcgtacagtccgtg
gcgcgtaatctgccgttgttcgacggtgcgttttccctgctgattatcgacgagtgccac
cgcatcagcgatgacgacgacagccagtaccagcaaattattcagcacctgcaaaaatcc
aatccgcaactgcggctgttggggctgaccgccacgccttaccggctgggtaaaggctgg
atttatcagtatcactaccacggttttacccgcggcgatgccggcagcctgtttcgcgac
tgcatttatgaactgccgctgcgctacatgatcaagaacggctatctggtgccgccggaa
cggctcgacatgccgattgtacagtacgatttcagccgcctggaggccagaagcaacggc
ctgttcagtgagatagacctcaaccgcgagctgaaacagcaaaatcgcatcacgccgcat
atcatcagccagatcgtcgaatatgccgaaacgcgcaaaggggtgatgattttcgcctcc
accgttgagcatgctcgtgagatccacggcctgctgccggccggtgaggccgcgctggtc
agcgccgaaacgccggccgccgagcgggatgcgttgattgaggcgttcaaacaacagcgg
ctgcgctatctggtcaacgtagcggtgttgaccaccggctttgatgcaccgcatgtcgat
ctgatcgccattctgcgccccaccgaatccgtcagcctttatcagcaaatcgtcggccgc
gggctgcggctggctcccggcaaagaggattgcctgatcctcgactacgccggcaatccg
catgacctgtttacgccggaggtgggcgtcagcaaaccgcacagcgacagccagccggta
caagtattttgccccggctgcggcttcgccaacctgttctggggaaaatgcaccgagaat
ggcgacatcatcgagcattacggccgccgctgccaaggctggctggaagacgatgatggc
catcgcgaacagtgcgactaccgctttcgtttcaagagttgcccacactgtggcgcagaa
aacgacattgctgcgcgccgctgccaccagtgccaggaagtgctggtcgatcccgatgac
atgctgaaagaggcgctgaaactgaaggacgcattggttctgcgctgcggcggtatggag
ctgcaaagcgggcgcgatgaaaaaggcgaatggctgaaggccacctattacgatgaagac
ggtaccagcaccagcgagcgcttccgcctgcaaacgccggcgcagcgcaaagccttcgag
atgctgtttctgcgcccgcatcaacgcgcgccgggggtgccgttcagttggcaaaccgcc
gccgacgtgctggcccagcaggcactgttgcgtcatccggattttgtcgtggcgcgcaaa
cgtgggcaattctggcaggtgcgagaaaaagtgttcgattatcaaggccgcttccgccgg
gccaacgagctgtattga
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