Serratia sp. AS12: SerAS12_3570
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Entry
SerAS12_3570 CDS
T01502
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
srs
Serratia sp. AS12
Pathway
srs00071
Fatty acid degradation
srs00280
Valine, leucine and isoleucine degradation
srs00310
Lysine degradation
srs00362
Benzoate degradation
srs00380
Tryptophan metabolism
srs00410
beta-Alanine metabolism
srs00640
Propanoate metabolism
srs00650
Butanoate metabolism
srs00907
Pinene, camphor and geraniol degradation
srs00930
Caprolactam degradation
srs01100
Metabolic pathways
srs01110
Biosynthesis of secondary metabolites
srs01120
Microbial metabolism in diverse environments
srs01200
Carbon metabolism
srs01212
Fatty acid metabolism
Module
srs_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
srs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SerAS12_3570
00650 Butanoate metabolism
SerAS12_3570
09103 Lipid metabolism
00071 Fatty acid degradation
SerAS12_3570
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SerAS12_3570
00310 Lysine degradation
SerAS12_3570
00380 Tryptophan metabolism
SerAS12_3570
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SerAS12_3570
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SerAS12_3570
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SerAS12_3570
00930 Caprolactam degradation
SerAS12_3570
Enzymes [BR:
srs01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SerAS12_3570
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SerAS12_3570
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SerAS12_3570
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AEF51630
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All DBs
Position
complement(3805678..3807843)
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AA seq
721 aa
AA seq
DB search
MSFENALHEQRAKPSAFQLTLRPDNIGVITIDVPGDKVNTLKAEFVEQVNDVLIRAQQHT
ALEGLVIISGKPDSFIAGADITMIAACTSAKEAETLAKKGQSTLAQIAAFPVPVVAAIHG
ACLGGGLELALACHGRICSLDDKTALGLPEVQLGLLPGSGGTQRLPRLIGASKALDMMLT
GKHIRARQALRMGLVDDAVPQAILLQTAIERVKQGWQSRRELPWQERLLNGPLGKSLLFS
IVRKKTLEKTHGNYPAAEKIIQVVRTGLDSGSTSGYEAEARAFGELAMTPQSAALRSLFF
ASTALKKERGGNAQPHALHRVGILGGGLMGGGIACVTATRGGLPVRIKDVNETGINHALK
YSWDVLGKRVRSKRMRPAERQKQMMLISGSTDYTGFERVDIVVEAVFEDLALKQNMVAEI
ERHAAPHTIFASNTSSLPIGQIAAKAQRPQQVIGLHYFSPVDKMPLVEVIPHATTSEETI
ATTVALAHKQGKTAIVVADRAGFYVNRILAPYINEAARCLLEGEPIESLDKALVNFGFPV
GPITLLDEVGIDVGTKIIPVLVEQLGPRFAAPAAFDAVLKDGRKGRKNARGFYLYPSEGQ
QRQRGKRADTSVYLLLGITPKSHLQPAVIAQRCVMMMLNEAARCLDEGVIRSARDGDIGA
VFGIGFPPFLGGPFRYMDELGAEKVVKTLQYLQQQYGENFAPCERLQRMAQQGERFYPQG
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgagctttgaaaacgcattgcatgaacagcgggccaaaccctcggcttttcaactgacg
ctgcgcccggacaacatcggcgtgattaccatcgacgttccgggtgacaaggtcaatacg
ctgaaagccgagttcgtcgagcaggtgaatgacgtcctgatccgcgcgcaacagcatact
gcgctggaagggctggtgattatttccggcaagcccgattcgtttattgccggggcggac
atcaccatgattgccgcctgcaccagtgccaaagaggccgaaacgctggcgaagaaaggg
caaagcacgctggcgcagattgctgctttcccggtgccggtggtggcggctattcacggc
gcttgcctggggggcgggctggagctggctctggcctgccatggtcgcatctgttcgctg
gatgacaaaaccgctctcggcctgccggaagttcagcttggtctgctgccaggctccggc
ggtactcagcgattgccgcgcttgatcggcgccagcaaggcgctggacatgatgctgacc
ggcaagcatatccgtgcgcgtcaggcgctgcggatgggattggtggacgatgcggtgccg
caggcgattttgttgcagaccgccattgagcgggtcaagcagggctggcagagccgacgt
gaactgccgtggcaggaacgcttgctcaacggtcctctggggaaaagcctgttgttcagc
attgtgcgcaaaaaaacgctggagaaaacccacggcaactatccggcagcggaaaaaatc
attcaggtggtgcgtaccggcctggacagcggcagtaccagcggttatgaagccgaagcg
cgggccttcggcgaactggccatgacgccgcagtcggcggcgttgcgcagcctgttcttt
gcctctaccgccttgaagaaagagcgcggcggcaatgcgcaaccccatgcgctgcaccgc
gtcggcattctgggcggtggcctgatgggcggcggaattgcctgcgtgaccgccacgcgc
ggtggcctgccggtgcgaattaaagatgttaatgaaaccggcatcaaccatgcgctgaaa
tacagctgggatgtgcttggcaagcgggtacgcagcaaacgtatgcgtccggcggaacgg
caaaaacagatgatgctgatctccggctcgaccgattacaccggctttgagcgggtggat
atcgtggtggaagcggtgtttgaggatctggccctgaagcagaacatggtggccgagatt
gaacggcacgccgcgccgcataccattttcgcctccaatacctcgtcgttgccgattggc
cagattgccgccaaagcgcagcggccgcagcaggtgatcggcctgcattatttcagcccg
gtcgacaaaatgccgctggtagaggtgatcccccatgccaccaccagtgaggaaaccatt
gccaccaccgtggcgctggcgcacaaacagggcaagacggccattgtggtggccgatcgc
gccggtttctacgtcaaccgcattctggctccttatataaatgaagcggcgcgttgtttg
ctggaaggcgaaccgatcgaatcgctggacaaggcgctggtgaatttcggcttcccggtg
gggccgattaccttgcttgatgaagtgggcattgatgtgggcaccaagattatcccggtg
ttggtggaacagcttggtccgcgtttcgccgcgccggccgccttcgatgcggtactgaaa
gacgggcgcaaagggcgtaaaaatgcccggggtttctacctgtatccgagcgaaggccag
caacgtcagcggggcaagcgcgccgatacctcggtatatcttctgctgggcatcacaccg
aagtcgcatttgcagccggcggtcatcgcccagcgctgcgtgatgatgatgttgaatgaa
gcggctcgttgtctggacgaaggcgtgattcgcagcgctcgtgatggggatatcggcgcg
gtattcggtatcggttttccgccgttcctcggggggccgttccgttatatggacgagctc
ggtgctgagaaggtggttaaaacgctgcaatacctgcagcagcaatacggcgaaaacttt
gccccctgcgaacgcttgcagcgcatggcgcagcagggcgaacgcttttatccgcaaggg
gagtga
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