Serratia sp. AS12: SerAS12_3963
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Entry
SerAS12_3963 CDS
T01502
Name
(GenBank) Lysine decarboxylase
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
srs
Serratia sp. AS12
Pathway
srs00310
Lysine degradation
srs01100
Metabolic pathways
srs01110
Biosynthesis of secondary metabolites
srs01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
srs00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
SerAS12_3963
Enzymes [BR:
srs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
SerAS12_3963
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
AEF52014
LinkDB
All DBs
Position
complement(4229446..4231602)
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AA seq
718 aa
AA seq
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MNIIAIMSPTGVYYKDEPIRELHTALATMGFQLVYPKNGGDLLKLIEANARICGVIFDWD
DYSLELCSEINELNEYLPLYAFINQYSTFDVSLHEMRMVLYFFEYGLNAADDIAQRIQQY
TAEYIDTITPPLTKALFNYVREGKYTFCTPGHMAGTAFQKSPVGCLFYDFFGANTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFNAEQSYLVTNGTSTANKIVGMYSAPAGSTVLI
DRNCHKSLCHLLMMSDIVPIYLRPLRNAYGILGGIPQHEFTHESIAGRVAATANASWPVH
AVITNSTYDGLLYNTDYIKQTLDVPSIHFDSAWVPYTNFHPIYEGKSGMSGERTPGKVIY
ETQSTHKLLAAFSQASMIHIKGDYDESTFNEAYMMHTTTSPNYGIVASMETAAAMLRGNP
GRRLINRSVERALHFRREVQRLREESDSWFFDIWQPEEIDEAQCWPLNPDDNWHGFGNTD
SDHMYLDPIKVTILTPGMNELGTLEGSGIPAALVAKYLDERGIVVEKTGPYNLLFLFSIG
IDKTKAMSLLRGLTDFKRAYDLNLRVKNMLPDLYAEDPDFYRNMRIQDLAAGIHRLICLH
DLPRLMLRAFDVLPEMKLTPHQMFQQQVRGNVETCELDQLVGKVAANMILPYPPGVPLVM
PGEMITEESRAVLDFLLMLCSIGERYPGFETDIHGAKLTEDGRYLVKVLKTPPPDLNV
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcatcgcaatcatgagcccaacgggcgtctattacaaagatgagcctattcgt
gagctgcacactgcattggctacgatgggtttccagttggtttacccgaagaatggcggc
gatctgctgaagctgatcgaggccaatgcgcgtatttgcggagtgattttcgactgggac
gactacagcctggagctgtgcagcgaaattaacgagctgaatgaatatctaccgctatat
gcgtttatcaaccagtattccaccttcgacgtcagtcttcatgaaatgcgcatggtgctg
tatttctttgagtatggcttgaatgcggcagatgatattgcgcagcgtatccagcaatac
accgcagaatatatcgacaccattacgccgcccttaaccaaggcactattcaactacgtg
cgcgagggcaaatacaccttttgcaccccagggcatatggccggcactgccttccagaaa
agcccggttggctgcctgttttacgattttttcggtgcgaacaccttaaaagccgacgtc
tccatatcggtgaccgaactgggttcgctgctggaccataccggcccgcatctggaggcc
gaagagtatattgcgcgtacctttaacgccgagcagagctatctggtgaccaacggcacc
tccaccgccaacaagattgtcggcatgtattcggccccggcaggcagcacggtgttgatt
gaccgcaactgccataaatcgctgtgtcatctgctgatgatgagcgatatcgtcccgatc
tacctgcgtccgctgcgtaacgcctacggcattcttggtggcatcccgcagcatgaattt
acccatgagagcattgccggtcgagtcgccgccaccgcgaatgccagttggccggtacat
gcggtgattaccaactcaacctatgacggcctgctgtataacaccgattacatcaagcag
acgttggacgtgccatcaatccattttgactccgcctgggtaccctataccaacttccat
ccgatctacgaaggcaagagcggcatgagcggcgagcgcacgcccggcaaggtgatctac
gaaacgcagtccacgcacaagctgctggcggcattctcgcaggcctcgatgattcacatt
aaaggcgattacgacgaaagcacctttaacgaagcctatatgatgcataccaccacttcg
ccgaactacggcattgtggcgtcgatggagactgccgccgcgatgctgcgcggcaatcct
ggccggcggttgattaaccgctcggtagagcgtgcattgcatttccgtcgtgaggtgcag
cggttgcgggaggagagcgatagctggttcttcgatatctggcagcctgaagagatcgac
gaggcgcaatgctggccgttgaacccggacgataattggcatgggtttggcaataccgac
agcgatcacatgtatctcgatccgatcaaagtgacgatcctgacgccgggaatgaacgaa
ctgggtacgctggaggggagcgggatcccggcggcgctggtggcgaaatacctggacgag
cgcggcatcgtggtggaaaaaaccgggccttataatctgctgttcctgttcagtatcggc
attgataaaaccaaggcgatgagcctgctgcgtggcctgaccgattttaaacgcgcttac
gatcttaatctgcgggtgaagaacatgctgccggatctgtatgcggaggatcctgatttc
tatcgcaatatgcgcattcaggatctggcagccgggatccaccggttgatctgcctgcac
gatctgccgcggctgatgctgcgggcgttcgacgtgctgccggaaatgaagctgacgcca
caccaaatgttccagcagcaggtacgtggcaatgtggaaacctgcgaactggatcaactg
gtgggcaaggtggcggccaatatgatcctgccttatccaccaggcgtgccgttagtgatg
ccgggtgagatgatcaccgaggagagccgtgcggtgctcgatttcttgctgatgctgtgt
tctatcggcgagcgttatcccggctttgaaaccgatatccacggtgcgaaattgaccgag
gatgggcgttatctggtgaaggtactgaaaacgccgccgcccgatctcaacgtttga
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