Serratia sp. AS12: SerAS12_4026
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Entry
SerAS12_4026 CDS
T01502
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
srs
Serratia sp. AS12
Pathway
srs00300
Lysine biosynthesis
srs00470
D-Amino acid metabolism
srs01100
Metabolic pathways
srs01110
Biosynthesis of secondary metabolites
srs01120
Microbial metabolism in diverse environments
srs01230
Biosynthesis of amino acids
Module
srs_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
srs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SerAS12_4026
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SerAS12_4026
Enzymes [BR:
srs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SerAS12_4026
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AEF52077
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Position
complement(4307571..4308833)
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AA seq
420 aa
AA seq
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MPRALHDTTTALNAANLLALPQRFGCPVWAYDAAIISERISQLRHFDVIRFAQKACSNIH
ILRLMREQGVKVDSVSLGEIERALQAGFQPGGEPSDIVFTADVLDHATLARVSELKIPVN
VGSIDMLDQLGQVSVGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWYADLPQAVVKIQQ
YGLKLIGVHMHIGSGVDYQHLERVCDAMVQQVIDLGHDISAISAGGGLSIPYQYGEEAID
TEHYFGLWNSARERIAAHLGHPVSLEIEPGRFLMAEAGVLVAEVRAVKDMGSRHFVLVDA
GFNDLMRPAMYGSYHHISLLPADGRNTEHQPLRDTVIAGPLCESGDVFTQQAGGGIETRE
LPPVQVGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFEKGEPRLIRRRQTIEELIALELI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcgctttgcacgacacgactactgccctcaatgccgctaacctgctggccttg
cctcagcgttttggttgcccggtatgggcctatgatgccgctatcatcagcgagcgcatc
agccagttgcgccattttgacgtgatccgttttgcccaaaaggcctgctcgaatattcat
attctgcgcctgatgcgcgaacagggcgtcaaggtggattctgtctcgctgggcgagatt
gagcgtgcgttgcaggccggttttcagccgggcggtgagccaagcgacatcgtgtttacc
gccgatgtgctggaccacgcgacgctggcgcgcgtcagcgaattgaaaatcccggtgaac
gtcggctcgatcgatatgctggatcaactgggccaggtttccgttggtcatccggtgtgg
ttgcgtatcaacccgggctttggccacggccatagccagaaaaccaataccggcggcgag
aacagcaagcacgggatttggtatgccgatttgccgcaggcggtggtaaaaattcagcaa
tacggcctcaagctgatcggtgtgcatatgcatatcggttcgggcgtggattaccagcat
ctggagcgcgtgtgtgacgctatggtgcagcaggtgatcgatctgggtcatgatatcagc
gcgatttctgccggcggcgggctgtcgatcccctatcaatacggcgaagaggcgattgat
accgaacactattttggcctgtggaacagtgcacgcgagcgcattgccgcccatttgggc
cacccggtgagcctggagatcgagcctggtcgcttcctgatggcggaagccggggtgttg
gtcgccgaagtgcgtgcggtgaaagacatgggcagccgccactttgtgctggtggacgcc
ggttttaacgatttaatgcgtccggcgatgtatggcagctatcaccatatttctctgctg
ccggccgatggccgcaataccgagcatcagccgttgcgcgacaccgtgattgccgggccg
ctgtgcgaatccggcgacgtgttcacccaacaggccggtggcggcattgaaacccgcgag
ttgccgccggtgcaggtcggcgactatctggttttccatgataccggcgcctatggcgct
tcgatgtcttcaaactacaacagccgtccgctgctgccggaagtgttgttcgagaagggt
gagccacggctgatccgccggcggcagaccattgaagagttgattgcgctggaactcatc
tga
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