Serratia sp. AS12: SerAS12_4191
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Entry
SerAS12_4191 CDS
T01502
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
srs
Serratia sp. AS12
Brite
KEGG Orthology (KO) [BR:
srs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srs03016
]
SerAS12_4191
Enzymes [BR:
srs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
SerAS12_4191
Transfer RNA biogenesis [BR:
srs03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
SerAS12_4191
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AEF52239
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All DBs
Position
4484282..4484824
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AA seq
180 aa
AA seq
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MSSSRRLFFALTLPDALQQQVIRWRAEAFTPEAGRPVAAANLHLTLAFLGDVSAQKETAL
KKLAGRIIQPGFSMVLDDLGHWPRPGVVWLGTRRAPRGVLQLAELLRSQAARSGCYQSPM
PFHPHITLLRSATQPVAVPPATPGWTFSADTFALYQSVFENGRTRYHPLEQWPLTHQDTP
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgtccagttcgcgccgcctgtttttcgccctgaccttaccggatgcgctacagcaacag
gtgatccgctggcgcgccgaagctttcacgcccgaagccggtcggccggtcgccgcggct
aacctgcatctgacgctggcgtttctcggtgatgtcagcgcgcaaaaggaaaccgcgctg
aaaaaactggccggtcgcattatccaacccggcttcagcatggtactggacgatcttggc
cactggccgcgccctggcgtggtatggcttggcacccgccgcgcaccgcgaggagtgttg
caactggcggagctgttgcgatcgcaggcggcccgcagcggctgctaccaaagcccgatg
ccgtttcatccgcacatcaccctgctgcgctctgcaacgcaaccggtagccgtgccgccc
gcaacgccgggctggaccttcagcgccgacaccttcgccctgtaccagtcagtatttgag
aacggtcgcacgcgttatcacccgctggaacaatggcctttaacccatcaggatacccca
tga
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