Serratia sp. AS12: SerAS12_4195
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Entry
SerAS12_4195 CDS
T01502
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
srs
Serratia sp. AS12
Pathway
srs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SerAS12_4195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srs03019
]
SerAS12_4195
Enzymes [BR:
srs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SerAS12_4195
Messenger RNA biogenesis [BR:
srs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SerAS12_4195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AEF52243
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Position
4487557..4488876
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AA seq
439 aa
AA seq
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MTVIPREQHSISRKDISENALKVLYRLNKSGYEAYLVGGGVRDLLLGKKPKDFDITTNAT
PDQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEQQTPESDKNSSQQAQNGMLL
RDNIFGSIEEDAQRRDFTINSLYYGVADFTLRDYVDGMRDLQQGVIRLIGDPETRYREDP
VRMLRAVRFAAKLDMSISDETAEPIPRLASLLHEIPPARLFEESLKLLQAGYGYPTYLKL
CEYQLFQPLFPQIARHFTPSHDTPMERILAQVLKNTDYRLQNDMRVNPAFLFAAMLWYPL
LEHAQKLAQESGLAYYDAFALAMNDVLDEQCRSLAIPKRITTLVRDIWQLQLRLSRRQGK
RAHKLMEHPKFRAAYDLLALRAEVEENQEMLRLTEWWGEFQEATPARQKTMLSTLGDDPA
PRRARQRRPRRRTPRKEGA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgatcccacgcgagcagcattcaatctcacgcaaagacatcagtgagaatgcg
ctgaaagtgttgtaccgcctgaacaaatccggctacgaagcctatctggtcggtggcggc
gtgcgcgatttgttgctcggcaaaaagccgaaagatttcgacatcaccaccaacgccacg
ccagatcaggtgcgcaagctgttccgcaactgccgcctggtcggccgccgtttccgtctg
gcgcacgtgatgttcggaccggaaatcatcgaggttgccactttccgcggccaccacgag
cagcaaaccccggaatcagacaagaactcttcccagcaggcccaaaatggcatgctgttg
cgcgacaacatcttcggttcgatcgaagaagatgctcagcgccgcgacttcaccatcaac
agcctgtattacggcgtggcggacttcaccctgcgtgattatgttgacggtatgcgtgac
ttgcaacagggcgtgattcgcctgatcggcgatccggaaacccgctaccgcgaagatccg
gtgcgcatgctgcgcgcggtgcgctttgccgccaagctggacatgagcatcagcgacgaa
accgccgagccgatcccacgcctggcgtcgttgctgcatgaaatcccgccggcacgtctg
tttgaggaatcgctcaagctgctgcaggcaggttacggttacccaacctatttgaaactg
tgcgaataccagctgttccagccgctgttcccgcagatagcacgccacttcacgcctagc
catgacacgccgatggagcgcattctggcacaggtgctgaaaaacaccgattatcggctg
cagaacgacatgcgcgtcaatccggcgttcctgtttgctgctatgctttggtatccgctg
ctggaacatgcgcagaaactggcgcaggagagcgggctggcgtattacgacgccttcgcg
ttggcgatgaatgacgtgctggacgaacagtgtcgctcactggcgatcccgaaacgcatc
accacgttggttcgcgatatctggcagttgcagttgcgcctgtctcgccgccagggcaaa
cgtgcgcacaagctgatggaacacccaaaattccgcgccgcttacgatctgctggcgctg
cgcgccgaagtggaggaaaaccaggaaatgctgcgtctgaccgaatggtggggcgagttc
caggaagccacgccggcgcgtcagaaaaccatgttgagcactttgggtgacgatcccgcg
ccacgtcgcgcgcgtcagcgtcgccctcgccgccggacgccgcgtaaagaaggagcataa
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