Serratia sp. AS12: SerAS12_4252
Help
Entry
SerAS12_4252 CDS
T01502
Name
(GenBank) proprionate catabolism activator, Fis family
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
srs
Serratia sp. AS12
Brite
KEGG Orthology (KO) [BR:
srs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srs03000
]
SerAS12_4252
Transcription factors [BR:
srs03000
]
Prokaryotic type
Helix-turn-helix
Other families
SerAS12_4252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_2
Mg_chelatase
HTH_30
TraC
Xre-like-HTH
HTH_psq
HTH_10
HTH_17
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AEF52300
LinkDB
All DBs
Position
4547702..4549306
Genome browser
AA seq
534 aa
AA seq
DB search
MAYSSDLPDGAGDKPAIWIVSVTRLFDLLRDISLEFDSLASITPIQLGFEKAVQHIRQKL
LTERCDVIIAAGSNGAYLKSRLSVPVVLIKPGGFDIVQALAKARRMASSVGIITYKKTLP
ELLEFQHAFDLQLEQRSYVTKEEAREQLNELKAKGVQAVVGAGLITDLAQEAGLAGVLIY
STATVRQAFHEALSRTRSLQGAAQPRKPASGRETLRARYGINHLRGDSPMMESVRRTIAL
YGRSSAAVLIQGETGTGKELAAQAIHQEYFSRRAAAPFVAINCGAIAESLLEAELFGYEE
GAFTGSRRGGRAGLFETADGGTLFLDEIGEMPLPLQSRLLRVLEEKEITRVGGQRPIPVK
VRIISATHCSLENAVSRSEFRPDLFYRLNTLRLSLPALREREQDVMELAQWYLKQALAEL
SVPFTAAWMQGVFSCRQRLQGYSWPGNIRELRNMMQRLALFLSAEPSEALSEQKLCGWLP
ELVCVGLSPEPPAPVISDVKAALAQFNGDRAATAQYLGISRTTLWRRLREAGLS
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcttactcttcagatctaccggacggcgccggcgacaaacccgccatctggatcgtc
tccgtcacgcgcctgtttgacttgctgcgggatatcagcctggaattcgacagcctggca
agcatcacacccattcaactgggctttgaaaaagccgtgcagcatatccgccaaaaatta
ctcaccgagcgctgcgacgtcatcattgccgcaggctccaatggcgcctatttgaaaagc
cgcctttccgtgccggtggtgctgatcaaaccgggcggttttgacatcgttcaggcattg
gccaaggcgcgccgcatggcctcgtcagtaggcatcattacctataaaaaaacgctgccg
gagctgctggaatttcagcacgcgtttgatttgcaactggaacagcgcagctacgtcact
aaagaagaagcgcgcgagcaactcaatgaattaaaagcgaaaggcgttcaggcggtggtc
ggcgccgggctgattaccgatctggctcaggaagcggggcttgcaggcgtgctcatctat
tcgaccgccacggtgcgccaggcctttcacgaagcgctgagcaggacacgttccttgcaa
ggcgcggcccaaccgcgcaagcccgcctctggccgcgaaaccctgcgcgcgcgttatggg
ataaaccacctgcgcggcgattcaccaatgatggagagcgttcgccgcacgatcgcgctt
tatggccgctcatccgccgcggtactcatccagggggaaaccggcaccggtaaagagttg
gccgcccaggccattcatcaggaatacttttcccgccgtgcggcggctccgttcgttgcc
atcaactgcggcgccattgccgaatcgctgctggaggcggagttattcggttatgaagag
ggggcgtttaccggctcccgccgcggtgggcgcgccggcctgtttgaaacggccgatggg
ggcacgctgtttctcgatgagatcggtgaaatgccgctgcctctgcagagccgcttgctg
cgcgtgctggaagaaaaagaaatcacccgggttggcggacagcgccctatcccggtgaag
gtgcgcattatcagcgccacccactgcagcctggaaaacgcagtaagccgcagcgagttt
cgccccgatctgttttatcggctcaatacgctgcgcctgagcctgcccgcgctgcgtgag
cgagagcaggatgtcatggaactggcccagtggtatctgaaacaggcgctggcggagctg
agcgtgccatttaccgccgcctggatgcagggcgttttttcctgccgacaacggttgcag
ggctatagctggcccgggaatattcgcgagttgcgtaacatgatgcagcggctggcgctg
tttttaagcgccgaaccctcggaggcattgagtgaacagaagctctgcggctggctgccg
gagctggtttgcgtcgggttatcgcccgagccacctgcgcccgtcatatcagacgttaag
gccgctctggcgcaatttaatggcgatcgcgccgcgacagcgcagtacctcggcatcagc
cgcaccacgctgtggcggcgcctgcgggaagcaggcctctcttaa
DBGET
integrated database retrieval system
