Serratia sp. AS12: SerAS12_4385
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Entry
SerAS12_4385 CDS
T01502
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K05880
transcriptional activator for dhaKLM operon
Organism
srs
Serratia sp. AS12
Brite
KEGG Orthology (KO) [BR:
srs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srs03000
]
SerAS12_4385
Transcription factors [BR:
srs03000
]
Prokaryotic type
Other transcription factors
Others
SerAS12_4385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
HTH_8
GAF
PAS_4
AAA_2
AAA_5
PAS_9
HTH_50
PAS_8
Mg_chelatase
AAA_16
PAS_7
HTH_17
AAA_22
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AEF52430
LinkDB
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Position
4731433..4733382
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AA seq
649 aa
AA seq
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MENTSSWQQLMADGVLPPAQRPAPAIYASWLRCRSLMQPPVWKAPHCALGATFNSICQRK
NDLLTLGQAALEDACEYMEPRRCLLMILDESGCMLWLCGDALTRERLQQLGFTPGAYWAE
GDIGTNAPSLAAAEGHPIQVSGSEHVRQALHDWSFCATPVYDNSGRQRGSIALGCLLADS
AAGDLSLTLAIAREIGNSLNADGLLAESNRHLNQLYGLLDGVDDGVMAWDHRGYLQYINQ
RAATLLKLDEQQSQGKPLTQLLTLPALLKRAIAQRQPLQHVEVTFESQRQFIAALLTLKP
IFDGERCSFIALLHPIERLHQYVSSQLGRVSHSFEQMPSASLEMRRLIRYGQQAAKGQHP
ILLCGEEGVGKELLSQAIHNASERAAGPYIALNCQLLPEAQGLRELLGSDASEEEAGQLS
KFELANGGTLYLEQIEYLPAEMQSALLQVLKTGVVMRLNSNRVIPVDVRVIAGSAANLPL
LVQQNRFRRQLFYSLQAFEIQIPALRQRLSDIPLLVKHHLRALEQHFQCRFRVDDEVMAQ
LGLYLWPGNDLELKGVVERTAMICHGHHLQLADLPEHLLSHQPLLENEPQPGMPLLTLAE
MERQAIIRAANVSRGQLNEMAQLLGIGRTTLWRKIKQYQIDIRQFKLRA
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggagaacacctcaagctggcaacagttgatggccgatggcgtattgccgcccgcacaa
cgccctgcgccggcaatctatgcttcctggctgcgctgtcgcagcctgatgcagcccccc
gtgtggaaagcgccgcactgtgcgctcggcgccaccttcaactctatctgccagcgtaaa
aacgatctgctgacgctgggccaggcggcgctggaagacgcctgcgaatatatggagccc
cgtcgctgcctgctgatgatcctcgacgaaagcggctgcatgctgtggctgtgcggcgat
gccctgacgcgtgaacgcctgcagcaattgggatttacccccggcgcctattgggccgag
ggggacattggcaccaacgcgccttcgctggcggcggcagaaggccacccgatacaggtg
agcggcagcgagcatgtgcgccaggcactgcacgactggtcattctgcgccacgccggtt
tatgacaacagcggccgccagcgcggctcgattgcgctaggctgcctgctggctgattcc
gccgccggcgatctgtcactgacgctggcgatcgcacgcgagataggcaactcgctgaac
gccgacggcctgctggcggaatccaaccgtcacctgaaccagctttacggtttgcttgac
ggggtagatgacggggtgatggcctgggaccatcgcggctacctgcaatacatcaaccag
cgggccgccaccctgctgaagctggacgaacagcaaagccagggcaaacccttgacgcag
ttgctgacgctgcccgccctgctcaagcgggccatcgcccagcgccagccgctgcaacat
gttgaggtcaccttcgaaagccagcggcagtttatcgccgcgctgctgaccctaaaaccg
atcttcgacggcgagcgatgcagttttatcgccctgttgcacccgattgaacggctacac
cagtacgtcagcagccagctgggtcgcgtcagccacagctttgaacagatgccttccgct
tctctggaaatgcgccgtctgatccgctacggccagcaggcggcaaagggccagcacccg
atcctgctgtgcggcgaagaaggggtcggcaaggagttgctcagccaggcaatccacaac
gccagcgaacgcgccgctgggccatatatcgcgctcaactgccagttgttgccggaagcg
caggggctgcgcgaactgctgggcagcgacgccagtgaggaggaagcgggccagctcagc
aagtttgaactggccaacggcggcaccttgtacctggagcagattgagtatctgccggcg
gaaatgcagtcggcactgctgcaggtgctgaaaaccggtgtggtgatgcggcttaattcc
aaccgggtgatccccgtcgatgtccgggtgatcgccggcagcgccgccaatctgccgctg
ttggtgcagcagaaccgcttccgccgccagctgttttacagcctgcaagcgttcgagatc
cagatcccggcgctgcgccagcggctgagcgacattccgctgttggtaaagcaccacctg
cgtgcgctggaacagcatttccagtgccggttccgggtcgatgatgaagtcatggcccag
cttggcctgtatctgtggcccggcaacgatctggagctgaaaggcgtggttgagcgcacg
gcgatgatttgccacggccaccatctccagttagcggacttgcccgagcacttgctcagc
caccagccgctgctggaaaacgaaccgcagccgggtatgccgctgctgacgctggcggaa
atggaacgccaggcaatcattcgcgcggccaacgtcagccgcgggcagctcaacgaaatg
gcacagctgttgggcatcggccgcaccacgctgtggcgaaaaatcaaacaatatcaaatt
gatatcaggcaatttaagctacgtgcctga
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