Serratia sp. AS12: SerAS12_4410
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Entry
SerAS12_4410 CDS
T01502
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
srs
Serratia sp. AS12
Pathway
srs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SerAS12_4410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srs03400
]
SerAS12_4410
Enzymes [BR:
srs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
SerAS12_4410
DNA repair and recombination proteins [BR:
srs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SerAS12_4410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEF52455
LinkDB
All DBs
Position
complement(4761845..4762333)
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AA seq
162 aa
AA seq
DB search
MNLLAPNLRVVFCGINPGLSSAHQGYPFANGSNRFWKVLHQAGFTQRQLAPEQWQQLQDT
GCGITALVARPTVAASEVTREELRSGGEALKDKILQFQPRALAVLGKQAFSSAFGVKNAP
WGRQEMTIGKTEVWVLPNPSGLNRATLEQLTESYRELFLALE
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttggcgccaaacttgcgggtggtgttttgcggcatcaatcccggcctttcc
tccgcccatcagggctatccctttgccaatggcagcaaccgtttctggaaggtgctgcat
caggccggtttcacccagcgccaactggcgccggagcagtggcagcagttgcaggatacc
ggctgcggcatcaccgctttggtggcgcgcccgacggtcgcggccagcgaagtgacgcgt
gaagagttgcgcagcggcggtgaggcgttaaaagacaaaattctgcaattccagccgcgt
gcattggcggttctgggtaagcaggcgttcagcagcgccttcggggtgaaaaatgcgccc
tgggggcggcaggagatgacgatcggcaaaaccgaggtgtgggtattacctaatcccagc
gggttgaaccgtgccacgctggagcagcttacggagagctaccgcgagctgttcctggcg
ctggagtga
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integrated database retrieval system
